RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 ZNF439Q8NDP4 499 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 PHF21AQ96BD5 680 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 SSX3Q99909 188 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 DCSTAMPQ9H295 470 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 BTBD17A6NE02 478 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 RGS11O94810 467 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 DTYMKP23919 212 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 MORN2Q502X0 79 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
DDX54-203ENST00000546869 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
DDX54-203ENST00000546869 NDNFQ8TB73 568 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 S100A16Q96FQ6 103 aaKnown RBP11.69□□□□□ -0.54
DDX54-203ENST00000546869 MDFIQ99750 246 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 HDHD3Q9BSH5 251 aaPredicted RBP11.69□□□□□ -0.54
DDX54-203ENST00000546869 CHIAQ9BZP6 476 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 TOLLIPQ9H0E2 274 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 GNG12Q9UBI6 72 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 VPREB3Q9UKI3 123 aa11.69□□□□□ -0.54
DDX54-203ENST00000546869 FBN1P35555 2871 aaKnown RBP11.68□□□□□ -0.54
DDX54-203ENST00000546869 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 FAM172BPA6NC97 362 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 XRCC3O43542 346 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 FCGR3AP08637 254 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 ZNF182P17025 639 aaPredicted RBP11.68□□□□□ -0.54
DDX54-203ENST00000546869 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 ARHGDIBP52566 201 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 ZNF134P52741 427 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
DDX54-203ENST00000546869 MADCAM1Q13477 382 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 LTC4SQ16873 150 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 TPTE2P1Q5T6R2 138 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 CCDC144NLQ6NUI1 221 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 PRR18Q8N4B5 295 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 AP3S1Q92572 193 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
DDX54-203ENST00000546869 IGHV3-43A0A0B4J1X8 118 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 H3BUX3 64 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 IGHV3-43DP0DP04 118 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 HKR1P10072 659 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 ZBTB25P24278 435 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 BRS3P32247 399 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 TALDO1P37837 337 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 COMPP49747 757 aaPredicted RBP11.67□□□□□ -0.54
DDX54-203ENST00000546869 RAB7AP51149 207 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 ZNF137PP52743 207 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
DDX54-203ENST00000546869 ARFRP1Q13795 201 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 MZT2AQ6P582 158 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.67□□□□□ -0.54
DDX54-203ENST00000546869 SAMD12Q8N8I0 201 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 OR52L2PQ8NGH6 319 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 OR10X1Q8NGY0 326 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 HILPDAQ9Y5L2 63 aa11.67□□□□□ -0.54
DDX54-203ENST00000546869 A0A075B6Q4 140 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 TRAV18A0A075B6X5 111 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 FAM90A9PA6NNJ1 464 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 APOA1P02647 267 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 SCTP09683 121 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 IL3RAP26951 378 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 MNDAP41218 407 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 GNG10P50151 68 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 SPCS2Q15005 226 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 SETD6Q8TBK2 473 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 RPEQ96AT9 228 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 RAB18Q9NP72 206 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 ABCB10Q9NRK6 738 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 CEPT1Q9Y6K0 416 aa11.66□□□□□ -0.54
DDX54-203ENST00000546869 COL6A5A8TX70 2615 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 TMEM235A6NFC5 223 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 FABP7O15540 132 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 TXNL1O43396 289 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 GPR137BO60478 399 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 TPPPO94811 219 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 GAPDHP04406 335 aaKnown RBP11.65□□□□□ -0.54
DDX54-203ENST00000546869 SOX6P35712 828 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms