RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 NBR2O15453 112 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 OR7C1O76099 320 aaPredicted RBP9.73□□□□□ -0.85
SCAF11-208ENST00000546534 HTR3BO95264 441 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 MT-ND4P03905 459 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 HTR1AP08908 422 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 CRIP2P52943 208 aaPredicted RBP9.73□□□□□ -0.85
SCAF11-208ENST00000546534 ID3Q02535 119 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 RSU1Q15404 277 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 KCTD20Q7Z5Y7 419 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 SERPINA12Q8IW75 414 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 OR10V1Q8NGI7 309 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 IFT22Q9H7X7 185 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 GNG12Q9UBI6 72 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 ST3GAL6Q9Y274 331 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 ERGIC3Q9Y282 383 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 ALMS1Q8TCU4 4167 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 SLC25A17O43808 307 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 LY6G6CO95867 125 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-208ENST00000546534 CX3CL1P78423 397 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 RAB40BQ12829 278 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 LRRC36Q1X8D7 754 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 ASCL4Q6XD76 172 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 SATL1Q86VE3 508 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 PARP16Q8N5Y8 322 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 NSL1Q96IY1 281 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 MS4A10Q96PG2 267 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 GPER1Q99527 375 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 THAP7Q9BT49 309 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-208ENST00000546534 CST11Q9H112 138 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 A3GALT2U3KPV4 340 aa9.72□□□□□ -0.85
SCAF11-208ENST00000546534 H0Y980 276 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 AIPO00170 330 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 GEMIN2O14893 280 aaKnown RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 ARPC1BO15143 372 aaKnown RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 SLC16A6O15403 523 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 SPINT2O43291 252 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 RGS11O94810 467 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 NDUFA3O95167 84 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 CDRT1O95170 752 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 RBM11P57052 281 aaKnown RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 TMED1Q13445 227 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 STEAP3Q658P3 488 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 ZNF660Q6AZW8 331 aaPredicted RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 KDM4DQ6B0I6 523 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 SPATA24Q86W54 205 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 TCTEX1D1Q8N7M0 179 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 NPBQ8NG41 125 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 OR51A2Q8NGJ7 313 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 OR52N1Q8NH53 320 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 OR1L1Q8NH94 360 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 NEK7Q8TDX7 302 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 DDB2Q92466 427 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 PELI1Q96FA3 418 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 NABP2Q9BQ15 211 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 MRPL20Q9BYC9 149 aaKnown RBP9.71□□□□□ -0.86
SCAF11-208ENST00000546534 FAM192AQ9GZU8 254 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 CEPT1Q9Y6K0 416 aa9.71□□□□□ -0.86
SCAF11-208ENST00000546534 DAPL1A0PJW8 107 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 J3QLW9 94 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 HBZP02008 142 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 CSTBP04080 98 aaKnown RBP9.7□□□□□ -0.86
SCAF11-208ENST00000546534 T-ENOLP0DO92 83 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 ZNF19P17023 458 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 RAB3AP20336 220 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 POLR2IP36954 125 aaKnown RBP9.7□□□□□ -0.86
SCAF11-208ENST00000546534 TPPP2P59282 170 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 NHLRC3Q5JS37 347 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 ATAD3CQ5T2N8 411 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 RNLSQ5VYX0 342 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 PYHIN1Q6K0P9 492 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 IL34Q6ZMJ4 242 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 PRR18Q8N4B5 295 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 RFKQ969G6 155 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 THTPAQ9BU02 230 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 MED4Q9NPJ6 270 aa9.7□□□□□ -0.86
SCAF11-208ENST00000546534 TCRBV3S1A0A5B6 114 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 FCN1O00602 326 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 MAGEB3O15480 346 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 BRI3O95415 125 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 ADARB1P78563 741 aaKnown RBP9.69□□□□□ -0.86
SCAF11-208ENST00000546534 TMEM267Q0VDI3 215 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-208ENST00000546534 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 MORN2Q502X0 79 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 SYT6Q5T7P8 510 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-208ENST00000546534 ZNF529Q6P280 563 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 CD200R1LQ6Q8B3 271 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 UNQ5815/PRO19632Q6UWF5 114 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 PPP1R27Q86WC6 154 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 ODF3L1Q8IXM7 274 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 OR8J1Q8NGP2 316 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 ABHD5Q8WTS1 349 aa9.69□□□□□ -0.86
SCAF11-208ENST00000546534 CPNE2Q96FN4 548 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms