RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 A0A1W2PN81 502 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
RTN3-214ENST00000545432 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
RTN3-214ENST00000545432 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
RTN3-214ENST00000545432 CALB2P22676 271 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 ATP6V1E1P36543 226 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 CHRNA7P36544 502 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RSU1Q15404 277 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 MPV17LQ2QL34 196 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 MORN2Q502X0 79 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 HSP90B2PQ58FF3 399 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 SLC25A30Q5SVS4 291 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RFKQ969G6 155 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 CPNE2Q96FN4 548 aaPredicted RBP11.21□□□□□ -0.61
RTN3-214ENST00000545432 GABARAPL1Q9H0R8 117 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RIBC2Q9H4K1 309 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RAB9BQ9NP90 201 aa11.21□□□□□ -0.61
RTN3-214ENST00000545432 RCC2Q9P258 522 aaKnown RBP11.21□□□□□ -0.61
RTN3-214ENST00000545432 GEMIN2O14893 280 aaKnown RBP11.2□□□□□ -0.62
RTN3-214ENST00000545432 OR7C1O76099 320 aaPredicted RBP11.2□□□□□ -0.62
RTN3-214ENST00000545432 IGHV3-11P01762 117 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 HBZP02008 142 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 POLR2IP36954 125 aaKnown RBP11.2□□□□□ -0.62
RTN3-214ENST00000545432 TMEM267Q0VDI3 215 aaPredicted RBP11.2□□□□□ -0.62
RTN3-214ENST00000545432 OR51A2Q8NGJ7 313 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 CASTOR1Q8WTX7 329 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 SLA2Q9H6Q3 261 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 RANGRFQ9HD47 186 aaPredicted RBP11.2□□□□□ -0.62
RTN3-214ENST00000545432 ENOPH1Q9UHY7 261 aa11.2□□□□□ -0.62
RTN3-214ENST00000545432 AIPO00170 330 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 SPINT2O43291 252 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 HTR3BO95264 441 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 RAB3AP20336 220 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 ZP3P21754 424 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 LRRC36Q1X8D7 754 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 SATL1Q86VE3 508 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 TRUB1Q8WWH5 349 aaKnown RBP11.19□□□□□ -0.62
RTN3-214ENST00000545432 JAM3Q9BX67 310 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
RTN3-214ENST00000545432 METTL9Q9H1A3 318 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 RETNQ9HD89 108 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 CNOT2Q9NZN8 540 aaKnown RBP11.19□□□□□ -0.62
RTN3-214ENST00000545432 GNG12Q9UBI6 72 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 RNF150Q9ULK6 438 aa11.19□□□□□ -0.62
RTN3-214ENST00000545432 EXOGQ9Y2C4 368 aaKnown RBP11.19□□□□□ -0.62
RTN3-214ENST00000545432 DAPL1A0PJW8 107 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 SHISA3A0PJX4 238 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 FCN1O00602 326 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 RRHO14718 337 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 CDRT1O95170 752 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 ECSCRQ19T08 205 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 MOGAT2Q3SYC2 334 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
RTN3-214ENST00000545432 RNLSQ5VYX0 342 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 SYS1Q8N2H4 156 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 OR10V1Q8NGI7 309 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 OR1L1Q8NH94 360 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 C4orf36Q96KX1 117 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 MBNL3Q9NUK0 354 aaKnown RBP11.18□□□□□ -0.62
RTN3-214ENST00000545432 CEPT1Q9Y6K0 416 aa11.18□□□□□ -0.62
RTN3-214ENST00000545432 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 G3V2T6 193 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 J3QLW9 94 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 MAGEB3O15480 346 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 YPEL1O60688 119 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 CA11O75493 328 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 SC5DO75845 299 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 BRI3O95415 125 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 CSN3P07498 182 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 ZNF19P17023 458 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 ADARB1P78563 741 aaKnown RBP11.17□□□□□ -0.62
RTN3-214ENST00000545432 HTD2P86397 168 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 C6orf183Q5T699 404 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 LPCAT4Q643R3 524 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 SPATA24Q86W54 205 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 Q8N402 240 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 ACBD7Q8N6N7 88 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 OR2K2Q8NGT1 345 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 GPER1Q99527 375 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 CIB1Q99828 191 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 TMED9Q9BVK6 235 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 GABARAPL3Q9BY60 117 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 FAM53CQ9NYF3 392 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
RTN3-214ENST00000545432 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms