RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 IGF1P05019 195 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 OR8U8P0C7N1 319 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 SPNP16150 400 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 BDKRB2P30411 391 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 GLP1RP43220 463 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 MTNR1BP49286 362 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 GNG10P50151 68 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 PPP3R1P63098 170 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 SCN1BQ07699 218 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 SPHARQ15513 63 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 FAM27D1Q5T7N8 215 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 SATL1Q86VE3 508 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 ZNF491Q8N8L2 437 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 ZNF565Q8N9K5 539 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 OR10A7Q8NGE5 316 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 OR10K1Q8NGX5 313 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 TNFAIP8L1Q8WVP5 186 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 UBE2E2Q96LR5 201 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 S1PR3Q99500 378 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 ZNF184Q99676 751 aaPredicted RBP9.95□□□□□ -0.82
USP28-212ENST00000544750 GNB4Q9HAV0 340 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 ISYNA1Q9NPH2 558 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 RRP15Q9Y3B9 282 aaKnown RBP9.95□□□□□ -0.82
USP28-212ENST00000544750 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 DEGS1O15121 323 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 MAGEB3O15480 346 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 RGS10O43665 173 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 RRP9O43818 475 aaKnown RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 SC5DO75845 299 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 CDRT1O95170 752 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 GP9P14770 177 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 PPIFP30405 207 aaKnown RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 ZNF93P35789 620 aaPredicted RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 VEGFCP49767 419 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 GNB1P62873 340 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 ZNF616Q08AN1 781 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 MED22Q15528 200 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 RBM48Q5RL73 367 aaKnown RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 RSBN1Q5VWQ0 802 aaPredicted RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 FAM53AQ6NSI3 398 aaPredicted RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 PRSS48Q7RTY5 328 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 MOB3BQ86TA1 216 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 LINC00311Q8N616 119 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 OR1N2Q8NGR9 330 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 ST6GALNAC6Q969X2 333 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 CPNE2Q96FN4 548 aaPredicted RBP9.94□□□□□ -0.82
USP28-212ENST00000544750 KCTD7Q96MP8 289 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 GPER1Q99527 375 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 IL36GQ9NZH8 169 aa9.94□□□□□ -0.82
USP28-212ENST00000544750 MEIKINA0A087WXM9 373 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 A0A1W2PP11 408 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 VDAC1P21796 283 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 CD1BP29016 333 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 SSTR5P35346 364 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 MAP2K4P45985 399 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 REG1BP48304 166 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 PIGYQ3MUY2 71 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 PLPPR1Q8TBJ4 325 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 MRGPRDQ8TDS7 321 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 DCUN1D4Q92564 292 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 ISOC1Q96CN7 298 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 RBMXL1Q96E39 390 aaKnown RBP9.93□□□□□ -0.82
USP28-212ENST00000544750 CHCHD6Q9BRQ6 235 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 FAM192AQ9GZU8 254 aa9.93□□□□□ -0.82
USP28-212ENST00000544750 A8MZ25 164 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 ZNF736B4DX44 427 aaPredicted RBP9.92□□□□□ -0.82
USP28-212ENST00000544750 OVOL1O14753 267 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 DENRO43583 198 aaKnown RBP9.92□□□□□ -0.82
USP28-212ENST00000544750 MOSP00540 346 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 SOX6P35712 828 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 F2RL1P55085 397 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 TPBGQ13641 420 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 IL13RA2Q14627 380 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 RSU1Q15404 277 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 TBCEQ15813 527 aaPredicted RBP9.92□□□□□ -0.82
USP28-212ENST00000544750 LTC4SQ16873 150 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 ACSM3Q53FZ2 586 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 NHLRC3Q5JS37 347 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 LIPKQ5VXJ0 399 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 Q8N1Y9 231 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 OR8H1Q8NGG4 311 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 RTN4IP1Q8WWV3 396 aaPredicted RBP9.92□□□□□ -0.82
USP28-212ENST00000544750 NR1H4Q96RI1 486 aaPredicted RBP9.92□□□□□ -0.82
USP28-212ENST00000544750 RASL11BQ9BPW5 248 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 TMED9Q9BVK6 235 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 BARHL1Q9BZE3 327 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 CKLFQ9UBR5 152 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 VSIG4Q9Y279 399 aa9.92□□□□□ -0.82
USP28-212ENST00000544750 HERC2O95714 4834 aa9.91□□□□□ -0.82
USP28-212ENST00000544750 TRAV39A0A0B4J263 110 aa9.91□□□□□ -0.82
USP28-212ENST00000544750 FAM90A10PA6NDY2 464 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms