RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ZNF729A6NN14 1252 aaPredicted RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 F5H5P2 479 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ISLRO14498 428 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ZNF73O43830 326 aaPredicted RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 TRGV3P03979 118 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 PRB1P04280 392 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 CD9P21926 228 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ARR3P36575 388 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 DHRS2Q13268 280 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 HSP90AA4PQ58FG1 418 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 C16orf87Q6PH81 154 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 LYZL2Q7Z4W2 148 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ZFP82Q8N141 532 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ARHGAP18Q8N392 663 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 Q8NAQ8 132 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 FAM184AQ8NB25 1140 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ZNF738Q8NE65 137 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 OR51L1Q8NGJ5 315 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 NDNFQ8TB73 568 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ZNF707Q96C28 371 aaPredicted RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 FXYD5Q96DB9 178 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 SLC25A44Q96H78 314 aaPredicted RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 KLF6Q99612 283 aaPredicted RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 SDHAF3Q9NRP4 125 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 DDX18Q9NVP1 670 aaKnown RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 ANXA10Q9UJ72 324 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 FADS3Q9Y5Q0 445 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 SLX4Q8IY92 1834 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 HERC1Q15751 4861 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 SPTBN1Q01082 2364 aaKnown RBP0.91□□□□□ -2.26
YBX3-214ENST00000544501 ABCA13Q86UQ4 5058 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 RALGAPA2Q2PPJ7 1873 aa0.9□□□□□ -2.26
YBX3-214ENST00000544501 DDX60Q8IY21 1712 aaKnown RBP0.9□□□□□ -2.27
YBX3-214ENST00000544501 LOC100653049A0A140TA62 436 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 SLC5A10A0PJK1 596 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 A8MWP4 228 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 H3BMM0 161 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 GYG2O15488 501 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 DHRS3O75911 302 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 KRT34O76011 436 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 IGKV1D-33P01593 117 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 IGKV1-33P01594 117 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 RLN2P04090 185 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CTSGP08311 255 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 GZMAP12544 262 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 IL9P15248 144 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CBR1P16152 277 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CNTFRP26992 372 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 ELK4P28324 431 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 GPR4P46093 362 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 PSMD8P48556 350 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 IFFO1Q0D2I5 559 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 STK38Q15208 465 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 UBE2NLQ5JXB2 153 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 GLYATQ6IB77 296 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 ASCL4Q6XD76 172 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CYP4Z1Q86W10 505 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 OR51Q1Q8NH59 317 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 C2orf15Q8WU43 125 aaKnown RBP0.9□□□□□ -2.27
YBX3-214ENST00000544501 TOP1MTQ969P6 601 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 FAM131CQ96AQ9 280 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 UBE2WQ96B02 151 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 C20orf166-AS1Q96NR2 134 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CHRNA10Q9GZZ6 450 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 SLC38A1Q9H2H9 487 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 FBXO44Q9H4M3 255 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 C11orf49Q9H6J7 331 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 PLEKHA1Q9HB21 404 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 CRLF2Q9HC73 371 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 DDIT4Q9NX09 232 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 NAGKQ9UJ70 344 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 C14orf166Q9Y224 244 aaKnown RBP0.9□□□□□ -2.27
YBX3-214ENST00000544501 KPTNQ9Y664 436 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 POLR3AO14802 1390 aaPredicted RBP0.9□□□□□ -2.27
YBX3-214ENST00000544501 EIF3AQ14152 1382 aaKnown RBP0.9□□□□□ -2.27
YBX3-214ENST00000544501 DUOX1Q9NRD9 1551 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 MYO16Q9Y6X6 1858 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 BSNQ9UPA5 3926 aa0.9□□□□□ -2.27
YBX3-214ENST00000544501 USP42Q9H9J4 1324 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 MXRA5Q9NR99 2828 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 TACC2O95359 2948 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 COL6A6A6NMZ7 2263 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 C2orf16Q68DN1 1984 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PLXNA1Q9UIW2 1896 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PRKDCP78527 4128 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 A0A0B4J2C4 111 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 A0A0J9YYE9 177 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 A0A1W2PPV4 95 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 GMDSO60547 372 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PSIP1O75475 530 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 PDYNP01213 254 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 TRBC1P01850 177 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 OPN1SWP03999 348 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 CECR9P0C854 216 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 SCGB1C2P0DMR2 95 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 GTF2F2P13984 249 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PRTN3P24158 256 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 CRABP2P29373 138 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms