RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CD24P25063 80 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 IL3RAP26951 378 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 VEGFCP49767 419 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 KRTAP10-3P60369 221 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 HTD2P86397 168 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 SRSF4Q08170 494 aaKnown RBP13.02□□□□□ -0.33
CIT-212ENST00000543239 HMGN3Q15651 99 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 ZNF880Q6PDB4 577 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 SLC25A48Q6ZT89 311 aaKnown RBP13.02□□□□□ -0.33
CIT-212ENST00000543239 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 CFHR4Q92496 578 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 RBM14Q96PK6 669 aaKnown RBP13.02□□□□□ -0.33
CIT-212ENST00000543239 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.33
CIT-212ENST00000543239 M0QZK8 103 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 GAPDHP04406 335 aaKnown RBP13.01□□□□□ -0.33
CIT-212ENST00000543239 FAM106CPP0CH98 169 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 RAB6AP20340 208 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 ZNF137PP52743 207 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 TMEM50BP56557 158 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 DIAPH2-AS1Q14236 149 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 HABP2Q14520 560 aaPredicted RBP13.01□□□□□ -0.33
CIT-212ENST00000543239 LY6G6FQ5SQ64 297 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 FAM53AQ6NSI3 398 aaPredicted RBP13.01□□□□□ -0.33
CIT-212ENST00000543239 Q6ZTK2 550 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 NR2C2APQ86WQ0 139 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 OR10V1Q8NGI7 309 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 OR56B4Q8NH76 319 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 ST6GALNAC6Q969X2 333 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 PTX4Q96A99 478 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 GALMQ96C23 342 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 SLC25A33Q9BSK2 321 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 OR51E2Q9H255 320 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 CHMP1AQ9HD42 196 aaPredicted RBP13.01□□□□□ -0.33
CIT-212ENST00000543239 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 ABRACLQ9P1F3 81 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 MGAT4AQ9UM21 535 aa13.01□□□□□ -0.33
CIT-212ENST00000543239 A0A087WXM4 84 aa13□□□□□ -0.33
CIT-212ENST00000543239 NOTOA8MTQ0 251 aa13□□□□□ -0.33
CIT-212ENST00000543239 TXNL1O43396 289 aa13□□□□□ -0.33
CIT-212ENST00000543239 RGS11O94810 467 aa13□□□□□ -0.33
CIT-212ENST00000543239 LPLP06858 475 aa13□□□□□ -0.33
CIT-212ENST00000543239 MORN2Q502X0 79 aa13□□□□□ -0.33
CIT-212ENST00000543239 CT45A1Q5HYN5 189 aa13□□□□□ -0.33
CIT-212ENST00000543239 DRAM1Q8N682 238 aa13□□□□□ -0.33
CIT-212ENST00000543239 CT45A3Q8NHU0 189 aa13□□□□□ -0.33
CIT-212ENST00000543239 ARHGAP5-AS1Q96IT6 56 aa13□□□□□ -0.33
CIT-212ENST00000543239 KCTD7Q96MP8 289 aa13□□□□□ -0.33
CIT-212ENST00000543239 PECRQ9BY49 303 aa13□□□□□ -0.33
CIT-212ENST00000543239 VCX3AQ9NNX9 186 aa13□□□□□ -0.33
CIT-212ENST00000543239 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
CIT-212ENST00000543239 AK3Q9UIJ7 227 aa13□□□□□ -0.33
CIT-212ENST00000543239 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 SLC31A2O15432 143 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 YPEL1O60688 119 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 SNRNP70P08621 437 aaKnown RBP12.99□□□□□ -0.33
CIT-212ENST00000543239 CD36P16671 472 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 GADD45AP24522 165 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 ZNF134P52741 427 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 BLCAPP62952 87 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 PLA2G7Q13093 441 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 Q6ZPA2 131 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 KLHDC1Q8N7A1 406 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 TSPAN14Q8NG11 270 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 OR52L2PQ8NGH6 319 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 RTN4IP1Q8WWV3 396 aaPredicted RBP12.99□□□□□ -0.33
CIT-212ENST00000543239 YPEL2Q96QA6 119 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
CIT-212ENST00000543239 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 M0QZ24 198 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 PPP1CCP36873 323 aaKnown RBP12.98□□□□□ -0.33
CIT-212ENST00000543239 EBI3Q14213 229 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 GNMTQ14749 295 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 HERPUD1Q15011 391 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 TIMM50Q3ZCQ8 353 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 ARSJQ5FYB0 599 aaPredicted RBP12.98□□□□□ -0.33
CIT-212ENST00000543239 PLAC9Q5JTB6 97 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 IZUMO1Q8IYV9 350 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 OR10R2Q8NGX6 335 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 RAB3CQ96E17 227 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 CMSS1Q9BQ75 279 aaKnown RBP12.98□□□□□ -0.33
CIT-212ENST00000543239 HDHD3Q9BSH5 251 aaPredicted RBP12.98□□□□□ -0.33
CIT-212ENST00000543239 ABHD14AQ9BUJ0 271 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 MOB4Q9Y3A3 225 aa12.98□□□□□ -0.33
CIT-212ENST00000543239 A0A0B4J203 849 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 SMIM30A4D0T7 59 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 RAB27BO00194 218 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 LANCL1O43813 399 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
CIT-212ENST00000543239 TMEM11P17152 192 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 VDAC2P45880 294 aaPredicted RBP12.97□□□□□ -0.33
CIT-212ENST00000543239 REG1BP48304 166 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 HLA-DRB3P79483 266 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 MRPS15P82914 257 aaKnown RBP12.97□□□□□ -0.33
CIT-212ENST00000543239 HES1Q14469 280 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 SFXN4Q6P4A7 337 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 C5orf24Q7Z6I8 188 aa12.97□□□□□ -0.33
CIT-212ENST00000543239 MOB3BQ86TA1 216 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms