RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 C3orf80F5H4A9 247 aa11□□□□□ -0.65
DDX11-223ENST00000542838 PHOX2AO14813 284 aa11□□□□□ -0.65
DDX11-223ENST00000542838 IFNA1P01562 189 aa11□□□□□ -0.65
DDX11-223ENST00000542838 IGKV1-39P01597 117 aa11□□□□□ -0.65
DDX11-223ENST00000542838 IGKV1D-39P04432 117 aa11□□□□□ -0.65
DDX11-223ENST00000542838 FOLR3P41439 243 aa11□□□□□ -0.65
DDX11-223ENST00000542838 ELLP55199 621 aaPredicted RBP11□□□□□ -0.65
DDX11-223ENST00000542838 CLN3Q13286 438 aa11□□□□□ -0.65
DDX11-223ENST00000542838 MRGPRGQ86SM5 289 aa11□□□□□ -0.65
DDX11-223ENST00000542838 OR10V1Q8NGI7 309 aa11□□□□□ -0.65
DDX11-223ENST00000542838 HIST1H2BLQ99880 126 aa11□□□□□ -0.65
DDX11-223ENST00000542838 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
DDX11-223ENST00000542838 MAP1LC3B2A6NCE7 125 aa11□□□□□ -0.65
DDX11-223ENST00000542838 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
DDX11-223ENST00000542838 TSTD3H0UI37 97 aa11□□□□□ -0.65
DDX11-223ENST00000542838 GDF1P27539 372 aa11□□□□□ -0.65
DDX11-223ENST00000542838 HBG1P69891 147 aa11□□□□□ -0.65
DDX11-223ENST00000542838 HBG2P69892 147 aa11□□□□□ -0.65
DDX11-223ENST00000542838 LRRC75BQ2VPJ9 315 aa11□□□□□ -0.65
DDX11-223ENST00000542838 TCEAL6Q6IPX3 200 aa11□□□□□ -0.65
DDX11-223ENST00000542838 SSX9Q7RTT3 188 aa11□□□□□ -0.65
DDX11-223ENST00000542838 HAPLN4Q86UW8 402 aa11□□□□□ -0.65
DDX11-223ENST00000542838 MAP1LC3BQ9GZQ8 125 aa11□□□□□ -0.65
DDX11-223ENST00000542838 ZNF552Q9H707 407 aaPredicted RBP11□□□□□ -0.65
DDX11-223ENST00000542838 PITPNC1Q9UKF7 332 aa11□□□□□ -0.65
DDX11-223ENST00000542838 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
DDX11-223ENST00000542838 DDTP30046 118 aa11□□□□□ -0.65
DDX11-223ENST00000542838 SERF2P84101 59 aa11□□□□□ -0.65
DDX11-223ENST00000542838 ADIRFQ15847 76 aa11□□□□□ -0.65
DDX11-223ENST00000542838 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
DDX11-223ENST00000542838 LYSMD4Q5XG99 296 aa11□□□□□ -0.65
DDX11-223ENST00000542838 BEND4Q6ZU67 534 aa11□□□□□ -0.65
DDX11-223ENST00000542838 REC114Q7Z4M0 266 aa11□□□□□ -0.65
DDX11-223ENST00000542838 OR10A7Q8NGE5 316 aa11□□□□□ -0.65
DDX11-223ENST00000542838 PRRG4Q9BZD6 226 aa11□□□□□ -0.65
DDX11-223ENST00000542838 RBKSQ9H477 322 aa11□□□□□ -0.65
DDX11-223ENST00000542838 OR1A1Q9P1Q5 309 aa11□□□□□ -0.65
DDX11-223ENST00000542838 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
DDX11-223ENST00000542838 ZNF737O75373 536 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 IL2RGP31785 369 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 CXCL12P48061 93 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 HLA-BQ31612 363 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 SPANXN5Q5MJ07 72 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 OR5A2Q8NGI9 324 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 GTF3AQ92664 365 aaKnown RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 MEGF10Q96KG7 1140 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 CDH20Q9HBT6 801 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 RBM7Q9Y580 266 aaKnown RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 TNRC6AQ8NDV7 1962 aaKnown RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 A0A087X0M5 115 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 TRAV24A0A0B4J272 114 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 A0A1B0GX30 115 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 K7ESF4 209 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 NGFP01138 241 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 WDR25Q64LD2 544 aaPredicted RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 UNQ6494/PRO21346Q6UXR6 183 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 PRR18Q8N4B5 295 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 OR4X1Q8NH49 305 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
DDX11-223ENST00000542838 SMIM7Q9BQ49 75 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 GAB2Q9UQC2 676 aa10.99□□□□□ -0.65
DDX11-223ENST00000542838 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 A0A1B0GV90 55 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 NCR3LG1Q68D85 454 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 C16orf82Q7Z2V1 217 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 NECAP1Q8NC96 275 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 OR1K1Q8NGR3 316 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 TMEM45BQ96B21 275 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 OR4C12Q96R67 309 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 WDR61Q9GZS3 305 aaKnown RBP10.98□□□□□ -0.65
DDX11-223ENST00000542838 DEPPQ9NTK1 212 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 SLC39A9Q9NUM3 307 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 TRAV39A0A0B4J263 110 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 CD55P08174 381 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 FOXG1P55316 489 aaPredicted RBP10.98□□□□□ -0.65
DDX11-223ENST00000542838 SRYQ05066 204 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 ACSF3Q4G176 576 aaPredicted RBP10.98□□□□□ -0.65
DDX11-223ENST00000542838 LINC00596Q86U02 117 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 TMEM183AQ8IXX5 376 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 LHX4Q969G2 390 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 PINX1Q96BK5 328 aaKnown RBP10.98□□□□□ -0.65
DDX11-223ENST00000542838 GPR87Q9BY21 358 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 SRD5A3Q9H8P0 318 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 KCNS2Q9ULS6 477 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 KIAA2026Q5HYC2 2103 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 UBE2L5PA0A1B0GUS4 154 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 DEGS1O15121 323 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 IFNA10P01566 189 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 TUBG1P23258 451 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 OTX2P32243 289 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 SSTP61278 116 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 HNF4GQ14541 408 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
DDX11-223ENST00000542838 LRP5LA4QPB2 252 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms