RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DNAJC24Q6P3W2 148 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CYHR1Q6ZMK1 362 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 Q6ZVH6 145 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC16A13Q7RTY0 426 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 DHFR2Q86XF0 187 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 RIMKLAQ8IXN7 391 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 STPG2Q8N412 459 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 C9orf62Q8N4C0 152 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 C11orf72Q8NBR9 251 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 OR9I1Q8NGQ6 314 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MCFD2Q8NI22 146 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM45AQ8TCE6 357 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ING5Q8WYH8 240 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CREB3L1Q96BA8 519 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 RNF185Q96GF1 192 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 C20orf144Q9BQM9 153 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 LXNQ9BS40 222 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 TMED9Q9BVK6 235 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 REG4Q9BYZ8 158 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 NXF2Q9GZY0 626 aaKnown RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ARV1Q9H2C2 271 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF442Q9H7R0 627 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 WDR54Q9H977 334 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM49BQ9NUQ9 324 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 NLE1Q9NVX2 485 aaPredicted RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 C1orf109Q9NX04 203 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 NUFIP1Q9UHK0 495 aaKnown RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SCP2D1Q9UJQ7 156 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SSR3Q9UNL2 185 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF257Q9Y2Q1 563 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 POLR3HQ9Y535 204 aaPredicted RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 HSPB11Q9Y547 144 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 WIF1Q9Y5W5 379 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 PRSS21Q9Y6M0 314 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FRYLO94915 3013 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ZFC3H1O60293 1989 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SMG1Q96Q15 3661 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ASPMQ8IZT6 3477 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 CYSRT1A8MQ03 144 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 M0QYV0 167 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 AIPO00170 330 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC16A4O15374 487 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SUPT7LO94864 414 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 AHSA1O95433 338 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 MOSP00540 346 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 PTHP01270 115 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 GUSBP08236 651 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 GIG44P09565 113 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 CD3GP09693 182 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 P0C879 139 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 FUT3P21217 361 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 MIPP30301 263 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 CA5AP35218 305 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 RPL14P50914 215 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 P2RX1P51575 399 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 OR12D2P58182 307 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SNRPD2P62316 118 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 HOXC5Q00444 222 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 HMGCS1Q01581 520 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 EIF4EBP2Q13542 120 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 OR1Q1Q15612 314 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SNRNP35Q16560 246 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF404Q494X3 552 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TCEAL5Q5H9L2 206 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SYT6Q5T7P8 510 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 HACD4Q5VWC8 232 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 GLYATQ6IB77 296 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 CLEC18BQ6UXF7 455 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 Q6ZT83 130 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 Q6ZTC4 211 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SMIM15Q7Z3B0 74 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 DEFB128Q7Z7B8 93 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 HS3ST5Q8IZT8 346 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM71E2Q8N5Q1 922 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 C14orf178Q8N769 122 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 YIPF7Q8N8F6 280 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 OR11H7Q8NGC8 314 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SPPL2BQ8TCT7 592 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 SFXN5Q8TD22 340 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 RNASEH2CQ8TDP1 164 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 C22orf15Q8WYQ4 148 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 OR5P2Q8WZ92 322 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 NARS2Q96I59 477 aaKnown RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM101Q96IK0 257 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 LINC00052Q96N35 136 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 HBEGFQ99075 208 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TEAD3Q99594 435 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 RBBP8Q99708 897 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 UGT2B28Q9BY64 529 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF436Q9C0F3 470 aaPredicted RBP2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TOLLIPQ9H0E2 274 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 DCSTAMPQ9H295 470 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 PRORYQ9H606 182 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 EDA2RQ9HAV5 297 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 TREX1Q9NSU2 369 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 VNN3Q9NY84 501 aa2.85□□□□□ -1.95
SFSWAP-211ENST00000542813 MED11Q9P086 117 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms