RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TUBG2Q9NRH3 451 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CISD1Q9NZ45 108 aaKnown RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 P2RX2Q9UBL9 471 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 VSIG4Q9Y279 399 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 NSG2Q9Y328 171 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 URGCP-MRPS24S4R325 110 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CHD3Q12873 2000 aaKnown RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TRAV26-1A0A087WT03 109 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TRBV2A0A0J9YWF9 115 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TRBV5-5A0A0J9YX44 114 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 A0A1W2PPV4 95 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CYSRT1A8MQ03 144 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 H0YL77 283 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 J3QLW9 94 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CD5LO43866 347 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 HYPMO75409 117 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 DEDDO75618 318 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 STK17BO94768 372 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 RCBTB2O95199 551 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ETHE1O95571 254 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 HLA-DRB1P01911 266 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ERGP11308 486 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 GNB3P16520 340 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 HMGA1P17096 107 aaKnown RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CSRP1P21291 193 aaKnown RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TSPOP30536 169 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 PYCR1P32322 319 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 OR1D2P34982 312 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 SSTR5P35346 364 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CLDN15P56746 228 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 RND3P61587 244 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 RPS24P62847 133 aaKnown RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF85Q03923 595 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 IL13RA2Q14627 380 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CEBPEQ15744 281 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 COX19Q49B96 90 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF658BQ4V348 819 aaPredicted RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 SPIN3Q5JUX0 258 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF776Q68DI1 518 aaPredicted RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 AGTRAPQ6RW13 159 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 WDR82Q6UXN9 313 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 STAC2Q6ZMT1 411 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 C19orf35Q6ZS72 473 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CYP2G1PQ6ZSU1 146 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 DPY19L4Q7Z388 723 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 NEGR1Q7Z3B1 354 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 S100A7AQ86SG5 101 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TMPRSS12Q86WS5 348 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 CPOQ8IVL8 374 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 SGPP2Q8IWX5 399 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 DEFB125Q8N687 156 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 TMEM99Q8N816 258 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 NECAP1Q8NC96 275 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 APCDD1LQ8NCL9 501 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 NPEPL1Q8NDH3 523 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 OR52R1Q8NGF1 315 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 OR51G1Q8NGK1 321 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 OR2Y1Q8NGV0 311 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF563Q8TA94 476 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 SLC38A5Q8WUX1 472 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 GNPNAT1Q96EK6 184 aaPredicted RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 GFI1Q99684 422 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 EGLN3Q9H6Z9 239 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 MTHFD2LQ9H903 347 aaPredicted RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 ANKRD10Q9NXR5 420 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 AHSPQ9NZD4 102 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 MCTS1Q9ULC4 181 aaKnown RBP4.94□□□□□ -1.62
XRCC4-206ENST00000542685 PAM16Q9Y3D7 125 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 RNF115Q9Y4L5 304 aa4.94□□□□□ -1.62
XRCC4-206ENST00000542685 MYO10Q9HD67 2058 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 SAA2-SAA4A0A096LPE2 208 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 TRBV9A0A0B4J1U6 114 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 TMEM189A5PLL7 270 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 RIIAD1A6NNX1 92 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 C17orf112F2Z3M2 114 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 SLC17A2O00624 439 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 DUSP11O75319 330 aaKnown RBP4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ALOX12BO75342 701 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 VENTXO95231 258 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 CTSDP07339 412 aaPredicted RBP4.93□□□□□ -1.62
XRCC4-206ENST00000542685 IGLC1P0CG04 106 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF43P17038 809 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ACVR1BP36896 505 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 GUCA1AP43080 201 aaPredicted RBP4.93□□□□□ -1.62
XRCC4-206ENST00000542685 GALR1P47211 349 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 SPINT3P49223 89 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 GNG4P50150 75 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 GPM6AP51674 278 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 RIPPLY3P57055 190 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ARG2P78540 354 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 RUNX1Q01196 453 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 PMP22Q01453 160 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF117Q03924 483 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 TSTA3Q13630 321 aaPredicted RBP4.93□□□□□ -1.62
XRCC4-206ENST00000542685 P2RY6Q15077 328 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF718Q3SXZ3 478 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 CTXN3Q4LDR2 81 aa4.93□□□□□ -1.62
XRCC4-206ENST00000542685 VAX1Q5SQQ9 334 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms