RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZNF702PQ9H963 129 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 ABCB10Q9NRK6 738 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
YBX3-212ENST00000542002 RAB22AQ9UL26 194 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 HSF4Q9ULV5 492 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 SSR3Q9UNL2 185 aa7.79□□□□□ -1.16
YBX3-212ENST00000542002 A0A087WXM4 84 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 TRBV6-6A0A0A6YYG2 114 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 A0A1B0GUS0 222 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 SH2D7A6NKC9 451 aaPredicted RBP7.78□□□□□ -1.16
YBX3-212ENST00000542002 H3BUI4 141 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 RAB27BO00194 218 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 TIMM23O14925 209 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 SPINT2O43291 252 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 TNFAIP8O95379 198 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 MYL9P24844 172 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 REG1BP48304 166 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 MXD1Q05195 221 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 C6orf183Q5T699 404 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 SLC25A48Q6ZT89 311 aaKnown RBP7.78□□□□□ -1.16
YBX3-212ENST00000542002 ODF3L1Q8IXM7 274 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 C8orf31Q8N9H6 132 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 OR10X1Q8NGY0 326 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 CREB3L1Q96BA8 519 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 CITED1Q99966 193 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 URM1Q9BTM9 101 aaKnown RBP7.78□□□□□ -1.16
YBX3-212ENST00000542002 OR2S2Q9NQN1 319 aa7.78□□□□□ -1.16
YBX3-212ENST00000542002 IGKV1-6A0A0C4DH72 117 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 NOTOA8MTQ0 251 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 OOSP1A8MZH6 123 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 ZNF736B4DX44 427 aaPredicted RBP7.77□□□□□ -1.17
YBX3-212ENST00000542002 SCTP09683 121 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
YBX3-212ENST00000542002 GNB3P16520 340 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 PPP1CCP36873 323 aaKnown RBP7.77□□□□□ -1.17
YBX3-212ENST00000542002 CEACAM3P40198 252 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 HTD2P86397 168 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 MADCAM1Q13477 382 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 HMGN3Q15651 99 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 TPRA1Q86W33 373 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 Q8N2B8 174 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 OR56B1Q8NGI3 324 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 OR10R2Q8NGX6 335 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 OR56B4Q8NH76 319 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 TOMM40LQ969M1 308 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 RPEQ96AT9 228 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 KCTD7Q96MP8 289 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 PARP12Q9H0J9 701 aaKnown RBP7.77□□□□□ -1.17
YBX3-212ENST00000542002 Q9N2K0 584 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 KCNIP1Q9NZI2 227 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 GNG12Q9UBI6 72 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 DAPK2Q9UIK4 370 aa7.77□□□□□ -1.17
YBX3-212ENST00000542002 IGHV3-72A0A0B4J1Y9 119 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 IGHV1-3A0A0C4DH29 117 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 HSD17B6O14756 317 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 SNRNP70P08621 437 aaKnown RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 SMIM18P0DKX4 95 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RAB6AP20340 208 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 BRS3P32247 399 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RPS19P39019 145 aaKnown RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 LSM3P62310 102 aaKnown RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 ZNF816Q0VGE8 651 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 HNF4GQ14541 408 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 TMEM95Q3KNT9 176 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 SFXN4Q6P4A7 337 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 TRAT1Q6PIZ9 186 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 ZNF554Q86TJ5 538 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 THNSL2Q86YJ6 484 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 OR4C13Q8NGP0 309 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 OR5H6Q8NGV6 325 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 SETD6Q8TBK2 473 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 CAPSLQ8WWF8 208 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RTN4IP1Q8WWV3 396 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 PTX4Q96A99 478 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 GALMQ96C23 342 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RAB3CQ96E17 227 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RBM14Q96PK6 669 aaKnown RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 NPFFR1Q9GZQ6 430 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 RANBP3Q9H6Z4 567 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 CHMP1AQ9HD42 196 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 RAB18Q9NP72 206 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 OR1A1Q9P1Q5 309 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 ZNF230Q9UIE0 474 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 PITPNC1Q9UKF7 332 aa7.76□□□□□ -1.17
YBX3-212ENST00000542002 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
YBX3-212ENST00000542002 A0A075B6Q4 140 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 IGKV1D-8A0A087WSZ0 117 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 MFNGO00587 321 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 YPEL1O60688 119 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 OR2F2O95006 317 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 GAPDHP04406 335 aaKnown RBP7.75□□□□□ -1.17
YBX3-212ENST00000542002 CD3GP09693 182 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 FAM106CPP0CH98 169 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 MNDAP41218 407 aa7.75□□□□□ -1.17
YBX3-212ENST00000542002 OR3A3P47888 321 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms