RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 FABP7O15540 132 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 HSPA12AO43301 675 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 ARG1P05089 322 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 HTR1DP28221 377 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 RAB7AP51149 207 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 SSBP1Q04837 148 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 AANATQ16613 207 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 PYHIN1Q6K0P9 492 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 CCDC144NLQ6NUI1 221 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 PRR18Q8N4B5 295 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 LINC00311Q8N616 119 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 RFESDQ8TAC1 157 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 IFT46Q9NQC8 304 aa14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-210ENST00000540931 ODF3BA8MYP8 253 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 LEUTXA8MZ59 168 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 J3QR06 171 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 CTDSP2O14595 271 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 OMGP23515 440 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 LOXL3P58215 753 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 ACTBP60709 375 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 ACTG1P63261 375 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 CNIH2Q6PI25 160 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 OR10J5Q8NHC4 309 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 MMP28Q9H239 520 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 DPM3Q9P2X0 92 aa14.28□□□□□ -0.12
CLSTN3-210ENST00000540931 MEIOCA2RUB1 952 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 CTDSPLO15194 276 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 TXNL1O43396 289 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 IGLV1-47P01700 117 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 HLA-DQB1P01920 261 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 COX7A1P24310 79 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 HLA-DRB5Q30154 266 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 SPANXN2Q5MJ10 180 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 OLFML2AQ68BL7 652 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 HOGA1Q86XE5 327 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 BEST4Q8NFU0 473 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 FCAMRQ8WWV6 532 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 IL1F10Q8WWZ1 152 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 HDHD3Q9BSH5 251 aaPredicted RBP14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 CABLES2Q9BTV7 478 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 ST6GALNAC5Q9BVH7 336 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 TOLLIPQ9H0E2 274 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 SLC23A1Q9UHI7 598 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF107Q9UII5 783 aaPredicted RBP14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.13
CLSTN3-210ENST00000540931 TRAV39A0A0B4J263 110 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 FABP12A6NFH5 140 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 SAA4P35542 130 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 TAS2R46P59540 309 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 ARPC4P59998 168 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 MADCAM1Q13477 382 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 MORN2Q502X0 79 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 LAX1Q8IWV1 398 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 TMEM86BQ8N661 226 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 OR2AK2Q8NG84 335 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 OR10X1Q8NGY0 326 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 OR1L1Q8NH94 360 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 ZDHHC16Q969W1 377 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 GINS4Q9BRT9 223 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 DPAGT1Q9H3H5 408 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 TAS2R8Q9NYW2 309 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 ZNF69Q9UC07 566 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 PSG11Q9UQ72 335 aa14.26□□□□□ -0.13
CLSTN3-210ENST00000540931 MEX3AA1L020 520 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 BTBD17A6NE02 478 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 GABARAPH6UMI1 98 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 RBBP9O75884 186 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 MMP23AO75900 390 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 SLC22A5O76082 557 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 TNFSF8P32971 234 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 IL18Q14116 193 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 ACTBL2Q562R1 376 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 SLC25A48Q6ZT89 311 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 IL17RELQ6ZVW7 336 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 GPX8Q8TED1 209 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 MEGF9Q9H1U4 602 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 MIXL1Q9H2W2 232 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 OCEL1Q9H607 264 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 NECAP2Q9NVZ3 263 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 PIPOXQ9P0Z9 390 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 POMT1Q9Y6A1 747 aa14.25□□□□□ -0.13
CLSTN3-210ENST00000540931 NBEAL1Q6ZS30 2694 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 TRBV6-7A0A0A0MS04 114 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 BUB1B-PAK6H3BSN5 160 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 TBPP20226 339 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 BRS3P32247 399 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 RCVRNP35243 200 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 CEACAM6P40199 344 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 KLRD1Q13241 179 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 LTC4SQ16873 150 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 TUSC1Q2TAM9 212 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 PLA1AQ53H76 456 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 FAM71F2Q6NXP2 309 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 BRD3OSQ6XYD6 125 aa14.24□□□□□ -0.13
CLSTN3-210ENST00000540931 LDLRAD3Q86YD5 345 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms