RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 MRPS24Q96EL2 167 aaKnown RBP11.36□□□□□ -0.59
MSRB3-209ENST00000540804 P2RX4Q99571 388 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 SPACA1Q9HBV2 294 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 ZFP57Q9NU63 452 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 LIN7CQ9NUP9 197 aaKnown RBP11.36□□□□□ -0.59
MSRB3-209ENST00000540804 FKBP14Q9NWM8 211 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 AP4M1O00189 453 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 SLC2A2P11168 524 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-209ENST00000540804 FUT3P21217 361 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 MYF6P23409 242 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 CNTFRP26992 372 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 PPP1CCP36873 323 aaKnown RBP11.35□□□□□ -0.59
MSRB3-209ENST00000540804 MYCNOSP40205 109 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 ZNF137PP52743 207 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 TAS2R43P59537 309 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 PNLIPRP3Q17RR3 467 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 MORN2Q502X0 79 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 ACSM3Q53FZ2 586 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 ODF3L1Q8IXM7 274 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 FAM71E2Q8N5Q1 922 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 SULT4A1Q9BR01 284 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 TMED9Q9BVK6 235 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 DCLRE1BQ9H816 532 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 OR2S2Q9NQN1 319 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 PLCXD1Q9NUJ7 323 aa11.35□□□□□ -0.59
MSRB3-209ENST00000540804 PDCD6O75340 191 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 DUS4LO95620 317 aaKnown RBP11.34□□□□□ -0.59
MSRB3-209ENST00000540804 CFHR3Q02985 330 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 GABPB1Q06547 395 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-209ENST00000540804 GPR50Q13585 617 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 TEX38Q6PEX7 206 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 UNQ9370/PRO34162Q6UXP9 181 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 LRRTM1Q86UE6 522 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 CDH26Q8IXH8 852 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
MSRB3-209ENST00000540804 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
MSRB3-209ENST00000540804 MBNL3Q9NUK0 354 aaKnown RBP11.34□□□□□ -0.59
MSRB3-209ENST00000540804 FAM90A10PA6NDY2 464 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 FAM90A7PA6NKC0 464 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 FAM90A23PA8MXZ1 464 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 PTGES3LE9PB15 166 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 CCL24O00175 119 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 CASQ2O14958 399 aaPredicted RBP11.33□□□□□ -0.6
MSRB3-209ENST00000540804 CD1AP06126 327 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 CDK1P06493 297 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 HTR2CP28335 458 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 OR3A3P47888 321 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 LUMP51884 338 aaPredicted RBP11.33□□□□□ -0.6
MSRB3-209ENST00000540804 LSAMPQ13449 338 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 Q3ZCU0 254 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 C6orf141Q5SZD1 244 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 COMMD1Q8N668 190 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 C8orf4Q9NR00 106 aa11.33□□□□□ -0.6
MSRB3-209ENST00000540804 KMT2CQ8NEZ4 4911 aaKnown RBP11.33□□□□□ -0.6
MSRB3-209ENST00000540804 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 G3V318 75 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 H0YHG0 523 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 LANCL1O43813 399 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 CHATP28329 748 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 SOX6P35712 828 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 UNC119Q13432 240 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 MMDQ15546 238 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 RBM48Q5RL73 367 aaKnown RBP11.32□□□□□ -0.6
MSRB3-209ENST00000540804 NKAIN3Q8N8D7 197 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 KCTD7Q96MP8 289 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 ABHD14AQ9BUJ0 271 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
MSRB3-209ENST00000540804 KCNIP1Q9NZI2 227 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 NKX1-2Q9UD57 310 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-209ENST00000540804 ZNF107Q9UII5 783 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-209ENST00000540804 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
MSRB3-209ENST00000540804 WSB1Q9Y6I7 421 aa11.32□□□□□ -0.6
MSRB3-209ENST00000540804 TXNL1O43396 289 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 CA11O75493 328 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 GLAP06280 429 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
MSRB3-209ENST00000540804 FOXE3Q13461 319 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-209ENST00000540804 TRAT1Q6PIZ9 186 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 CEACAM19Q7Z692 300 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 DPF1Q92782 380 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 NEDD4LQ96PU5 975 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 GFI1Q99684 422 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 JPT1Q9UK76 154 aa11.31□□□□□ -0.6
MSRB3-209ENST00000540804 SAA2-SAA4A0A096LPE2 208 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 IGHG4P01861 327 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-209ENST00000540804 VDAC1P21796 283 aa11.3□□□□□ -0.6
MSRB3-209ENST00000540804 MAPK3P27361 379 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms