RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 LURAP1Q96LR2 239 aa20.39■□□□□ 0.85
TTC3-225ENST00000540756 DNTTIP1Q9H147 329 aa20.39■□□□□ 0.85
TTC3-225ENST00000540756 NAA60Q9H7X0 242 aa20.39■□□□□ 0.85
TTC3-225ENST00000540756 CBLN4Q9NTU7 201 aa20.39■□□□□ 0.85
TTC3-225ENST00000540756 FBXO9Q9UK97 447 aaPredicted RBP20.39■□□□□ 0.85
TTC3-225ENST00000540756 DANCRP0C864 163 aa20.38■□□□□ 0.85
TTC3-225ENST00000540756 IGLV2-14P01704 120 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 PPOXP50336 477 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 RAP2BP61225 183 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 C6orf183Q5T699 404 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 LAMTOR1Q6IAA8 161 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 LAMP3Q9UQV4 416 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 UBR5O95071 2799 aaPredicted RBP20.37■□□□□ 0.85
TTC3-225ENST00000540756 OR8U9P0C7N5 309 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 OMGP23515 440 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 PPP1CCP36873 323 aaKnown RBP20.37■□□□□ 0.85
TTC3-225ENST00000540756 TCF23Q7RTU1 214 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 OR10V1Q8NGI7 309 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 OR5D13Q8NGL4 314 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 OR8U1Q8NH10 309 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 TP53RKQ96S44 253 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 YLPM1P49750 1951 aaKnown RBP20.37■□□□□ 0.85
TTC3-225ENST00000540756 CRYBG3Q68DQ2 2970 aa20.37■□□□□ 0.85
TTC3-225ENST00000540756 C13orf42A0A1B0GVH6 325 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 GPR31O00270 319 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 TNFRSF13BO14836 293 aaPredicted RBP20.36■□□□□ 0.85
TTC3-225ENST00000540756 MPPED1O15442 326 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 HLA-GP17693 338 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 ERP29P30040 261 aaKnown RBP20.36■□□□□ 0.85
TTC3-225ENST00000540756 HFEQ30201 348 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 UTF1Q5T230 341 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 TBC1D26Q86UD7 250 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 COQ8AQ8NI60 647 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 RANBP3Q9H6Z4 567 aaPredicted RBP20.36■□□□□ 0.85
TTC3-225ENST00000540756 ASH1LQ9NR48 2969 aaKnown RBP20.36■□□□□ 0.85
TTC3-225ENST00000540756 HOXB5P09067 269 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 TMEM187Q14656 261 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 HYLS1Q96M11 299 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 OR2S2Q9NQN1 319 aa20.36■□□□□ 0.85
TTC3-225ENST00000540756 LPCAT3Q6P1A2 487 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 GLYATL2Q8WU03 294 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 TMEM246Q9BRR3 403 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 PDCD10Q9BUL8 212 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 RNF150Q9ULK6 438 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 CHD6Q8TD26 2715 aa20.35■□□□□ 0.85
TTC3-225ENST00000540756 PHF1O43189 567 aaPredicted RBP20.34■□□□□ 0.85
TTC3-225ENST00000540756 NDUFB7P17568 137 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 LUMP51884 338 aaPredicted RBP20.34■□□□□ 0.85
TTC3-225ENST00000540756 CR1LQ2VPA4 569 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 MEX3BQ6ZN04 569 aaKnown RBP20.34■□□□□ 0.85
TTC3-225ENST00000540756 FAM219AQ8IW50 185 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 GALNT14Q96FL9 552 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 UBTD1Q9HAC8 227 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 CTSZQ9UBR2 303 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 RBM7Q9Y580 266 aaKnown RBP20.34■□□□□ 0.85
TTC3-225ENST00000540756 TACC2O95359 2948 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 A0A0B4J2A0 478 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 C5orf51A6NDU8 294 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 IGHV3-7P01780 117 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 LHFPL5Q8TAF8 219 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 C14orf79Q96F83 325 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 FAM234AQ9H0X4 552 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 SLC25A10Q9UBX3 287 aaPredicted RBP20.34■□□□□ 0.85
TTC3-225ENST00000540756 SHPKQ9UHJ6 478 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 KCNIP3Q9Y2W7 256 aa20.34■□□□□ 0.85
TTC3-225ENST00000540756 NKX6-3A6NJ46 265 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 A6NNC1 897 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 SPINT2O43291 252 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 ADAM20O43506 726 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 PGLYRP1O75594 196 aaPredicted RBP20.33■□□□□ 0.85
TTC3-225ENST00000540756 CGB3P0DN86 165 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 CGB7P0DN87 165 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 GZMHP20718 246 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 C17orf58Q2M2W7 97 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 C9orf62Q8N4C0 152 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 CCDC71LQ8N9Z2 235 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 OR10C1Q96KK4 312 aa20.33■□□□□ 0.85
TTC3-225ENST00000540756 TRAF4Q9BUZ4 470 aaPredicted RBP20.33■□□□□ 0.85
TTC3-225ENST00000540756 C3orf85A0A1B0GTC6 90 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 LRRC37A5PQ49AS3 106 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 DTX2Q86UW9 622 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 MSI2Q96DH6 328 aaKnown RBP20.32■□□□□ 0.84
TTC3-225ENST00000540756 METTL8Q9H825 291 aaKnown RBP20.32■□□□□ 0.84
TTC3-225ENST00000540756 KCNS2Q9ULS6 477 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 TRAV14DV4A0A0A6YYC5 116 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 BVESQ8NE79 360 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 RAB1BQ9H0U4 201 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 RAB18Q9NP72 206 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 CALYQ9NYX4 217 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 HSPB11Q9Y547 144 aa20.32■□□□□ 0.84
TTC3-225ENST00000540756 RP2O75695 350 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 CDKN1AP38936 164 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 ERVFRD-1P60508 538 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 RND3P61587 244 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 SRSF1Q07955 248 aaKnown RBP eCLIP20.31■□□□□ 0.845e-7■■■■□ 19.4
TTC3-225ENST00000540756 SRSF4Q08170 494 aaKnown RBP20.31■□□□□ 0.84
TTC3-225ENST00000540756 C5orf30Q96GV9 206 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 OR6C3Q9NZP0 311 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 DOCK11Q5JSL3 2073 aa20.31■□□□□ 0.84
TTC3-225ENST00000540756 KMT2BQ9UMN6 2715 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms