RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PRR18Q8N4B5 295 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 OR13C5Q8NGS8 318 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 CCDC107Q8WV48 283 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.09
CDCA3-208ENST00000540683 ACOT13Q9NPJ3 140 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 MBNL3Q9NUK0 354 aaKnown RBP8.27□□□□□ -1.09
CDCA3-208ENST00000540683 PLXNB1O43157 2135 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 C12orf77C9JDV5 145 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 LANCL1O43813 399 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 MPIG6BO95866 241 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 IGHG2P01859 326 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 HBZP02008 142 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 UCHL1P09936 223 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 MYF6P23409 242 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 MLLT11Q13015 90 aaPredicted RBP8.26□□□□□ -1.09
CDCA3-208ENST00000540683 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 C1orf100Q5SVJ3 147 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 UNQ9370/PRO34162Q6UXP9 181 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 BAIAP2L2Q6UXY1 529 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 OR2W3Q7Z3T1 314 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 OR2AK2Q8NG84 335 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 LEAP2Q969E1 77 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 S1PR3Q99500 378 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 ABHD14AQ9BUJ0 271 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 TMED9Q9BVK6 235 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 ANKRD60Q9BZ19 345 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 ABCG5Q9H222 651 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 BANF2Q9H503 90 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 PLGRKTQ9HBL7 147 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 TAF9BQ9HBM6 251 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 CHMP1AQ9HD42 196 aaPredicted RBP8.26□□□□□ -1.09
CDCA3-208ENST00000540683 PLEKHJ1Q9NW61 149 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 PIPOXQ9P0Z9 390 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 ZNF580Q9UK33 172 aa8.26□□□□□ -1.09
CDCA3-208ENST00000540683 A0A1W2PRX2 142 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 NUDT19A8MXV4 375 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 PDCD5O14737 125 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 YPEL1O60688 119 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 HSMCR30P0CW71 290 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 ARSBP15848 533 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 JUNBP17275 347 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-208ENST00000540683 VDAC1P21796 283 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 SOX6P35712 828 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 RPS27AP62979 156 aaKnown RBP8.25□□□□□ -1.09
CDCA3-208ENST00000540683 TPBGQ13641 420 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 HNF4GQ14541 408 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 PNLIPRP3Q17RR3 467 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 FBLN7Q53RD9 439 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 CXorf66Q5JRM2 361 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-208ENST00000540683 NKAPLQ5M9Q1 402 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 PRSS48Q7RTY5 328 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 OR4K15Q8NH41 348 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 FAM46BQ96A09 425 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 PHF21AQ96BD5 680 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-208ENST00000540683 YPEL2Q96QA6 119 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 CCDC90BQ9GZT6 254 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 Q9H521 79 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 KIAA1456Q9P272 454 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 TGP01266 2768 aa8.25□□□□□ -1.09
CDCA3-208ENST00000540683 UBE2QL1A1L167 161 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 MAGEA13PA6NCF6 341 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 G3V4G9 280 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ITGB1BP1O14713 200 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 RAB29O14966 203 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 SLC22A1O15245 554 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 PIN1P1O15428 100 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 MRPS14O60783 128 aaKnown RBP8.24□□□□□ -1.09
CDCA3-208ENST00000540683 IGHV3-7P01780 117 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 AMY1AP04745 511 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 AMY2AP04746 511 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ELANEP08246 267 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ZBTB25P24278 435 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 CHATP28329 748 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 BLVRBP30043 206 aaPredicted RBP8.24□□□□□ -1.09
CDCA3-208ENST00000540683 MC5RP33032 325 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 RPL23AP62750 156 aaKnown RBP8.24□□□□□ -1.09
CDCA3-208ENST00000540683 FOXE3Q13461 319 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ARL6IP1Q15041 203 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 RAB11BQ15907 218 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 TMEM95Q3KNT9 176 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 MORN2Q502X0 79 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 C1QL4Q86Z23 238 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 LYG1Q8N1E2 194 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 STPG2Q8N412 459 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 TMEM104Q8NE00 496 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 OR56B1Q8NGI3 324 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ST6GALNAC6Q969X2 333 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ORAI1Q96D31 301 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 ZNF251Q9BRH9 671 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 TM2D1Q9BX74 207 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 DUSP21Q9H596 190 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 HSF4Q9ULV5 492 aa8.24□□□□□ -1.09
CDCA3-208ENST00000540683 IGHV3-43A0A0B4J1X8 118 aa8.23□□□□□ -1.09
CDCA3-208ENST00000540683 TRAV39A0A0B4J263 110 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms