RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	IGHV3-43D	P0DP04	118 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GPR12	P47775	334 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	REG1B	P48304	166 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IRF3	Q14653	427 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ACSM3	Q53FZ2	586 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR2W3	Q7Z3T1	314 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FOXRED2	Q8IWF2	684 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MRPL41	Q8IXM3	137 aa	Known RBP	10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FAM71E2	Q8N5Q1	922 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR4K15	Q8NH41	348 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR1L1	Q8NH94	360 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	UBALD1	Q8TB05	177 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MRPL30	Q8TCC3	161 aa	Known RBP	10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MRAP	Q8TCY5	172 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	S1PR3	Q99500	378 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	P2RX4	Q99571	388 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MND1	Q9BWT6	205 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IGHV3-72	A0A0B4J1Y9	119 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ZNF736	B4DX44	427 aa	Predicted RBP	10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	AP4M1	O00189	453 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PDCD6	O75340	191 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CRTAP	O75718	401 aa	Predicted RBP	10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MYCNOS	P40205	109 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SLC35B1	P78383	322 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	QRFP	P83859	136 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CFHR3	Q02985	330 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TEX38	Q6PEX7	206 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ODF3L1	Q8IXM7	274 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR51D1	Q8NGF3	324 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CYYR1	Q96J86	154 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TM2D1	Q9BX74	207 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GON7	Q9BXV9	100 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CST11	Q9H112	138 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	DCLRE1B	Q9H816	532 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TAF9B	Q9HBM6	251 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	JPT1	Q9UK76	154 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LRRC42	Q9Y546	428 aa		10.31	□□□□□ -0.76
SEMA4D-223	ENST00000540475	NCBP2L	A6PVI3	153 aa	Known RBP	10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	YPEL1	O60688	119 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IGF1	P05019	195 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	VSIG8	P0DPA2	414 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SRM	P19623	302 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CHAT	P28329	748 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	F2RL1	P55085	397 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	KRTAP10-11	P60412	298 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	INSL4	Q14641	139 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SPHAR	Q15513	63 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PNLIPRP3	Q17RR3	467 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ZNF880	Q6PDB4	577 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	YPEL2	Q96QA6	119 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CHCHD6	Q9BRQ6	235 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GPR61	Q9BZJ8	451 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	DUSP21	Q9H596	190 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR2S2	Q9NQN1	319 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GNG12	Q9UBI6	72 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LINC00527	Q9UJ94	153 aa		10.3	□□□□□ -0.76
SEMA4D-223	ENST00000540475	UBE2QL1	A1L167	161 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TMEM14DP	A8MWL7	114 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475		K7EIL1	84 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SLC22A1	O15245	554 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	NAPSA	O96009	420 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IGHG4	P01861	327 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	UCHL1	P09936	223 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CDX1	P47902	265 aa	Predicted RBP	10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	RPS27A	P62979	156 aa	Known RBP	10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LSAMP	Q13449	338 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FOXE3	Q13461	319 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	HMGN3	Q15651	99 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FAM27D1	Q5T7N8	215 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GLT8D1	Q68CQ7	371 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ZNF833P	Q6ZTB9	187 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	C18orf65	Q6ZTR6	163 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR10V1	Q8NGI7	309 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SULT4A1	Q9BR01	284 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MCRIP2	Q9BUT9	160 aa	Known RBP	10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	VCX	Q9H320	206 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	KCNIP1	Q9NZI2	227 aa		10.29	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TRBV6-6	A0A0A6YYG2	114 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ELANE	P08246	267 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	HTR2C	P28335	458 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GABPB1	Q06547	395 aa	Predicted RBP	10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	UNC119	Q13432	240 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TPBG	Q13641	420 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	KIR2DS1	Q14954	304 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	KHDC1L	Q5JSQ8	128 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR10K2	Q6IF99	312 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	C8orf86	Q6ZUL3	223 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	C5orf24	Q7Z6I8	188 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ZNF695	Q8IW36	515 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PRR18	Q8N4B5	295 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FAM89B	Q8N5H3	189 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	OR52L2P	Q8NGH6	319 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	KCNG3	Q8TAE7	436 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MYOZ3	Q8TDC0	251 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	FAM46B	Q96A09	425 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	RASL11B	Q9BPW5	248 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	HSPB9	Q9BQS6	159 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ABHD14A	Q9BUJ0	271 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ISYNA1	Q9NPH2	558 aa		10.28	□□□□□ -0.76
SEMA4D-223	ENST00000540475	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms