RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TXNL4BQ9NX01 149 aaKnown RBP12.03□□□□□ -0.48
UBE3B-212ENST00000540230 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 STEAP1Q9UHE8 339 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 AK3Q9UIJ7 227 aa12.03□□□□□ -0.48
UBE3B-212ENST00000540230 IGHV3-72A0A0B4J1Y9 119 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 H3BUI4 141 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 OR2F2O95006 317 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 NAPSAO96009 420 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 VSIG10L2P0DP72 767 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 RAB3BP20337 219 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 MYL9P24844 172 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 ARHGDIBP52566 201 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 HMGN3Q15651 99 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 NEDD8Q15843 81 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 KCTD21Q4G0X4 260 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 TRAT1Q6PIZ9 186 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.48
UBE3B-212ENST00000540230 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 ST6GALNAC6Q969X2 333 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 ARHGAP5-AS1Q96IT6 56 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 OCSTAMPQ9BR26 566 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 URM1Q9BTM9 101 aaKnown RBP12.02□□□□□ -0.48
UBE3B-212ENST00000540230 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 OR51E2Q9H255 320 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 LIN7BQ9HAP6 207 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 PLEKHJ1Q9NW61 149 aa12.02□□□□□ -0.48
UBE3B-212ENST00000540230 TET2Q6N021 2002 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-212ENST00000540230 IGHV1-3A0A0C4DH29 117 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 IFITM5A6NNB3 132 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 PDCD5O14737 125 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 GALP22466 123 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 PPP1CCP36873 323 aaKnown RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 RAB7AP51149 207 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 ZNF816Q0VGE8 651 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 MOGAT2Q3SYC2 334 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 MORN2Q502X0 79 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 PLAC9Q5JTB6 97 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 TREML4Q6UXN2 200 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 C16orf82Q7Z2V1 217 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 OR8H3Q8N146 312 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 OR2S2Q9NQN1 319 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 STUB1Q9UNE7 303 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 TSPAN15O95858 294 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 FGF9P31371 208 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 PSMD7P51665 324 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 Q3ZCU0 254 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 ZNF554Q86TJ5 538 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 WIPF2Q8TF74 440 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-212ENST00000540230 PECRQ9BY49 303 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 WNT10AQ9GZT5 417 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 KCNIP1Q9NZI2 227 aa12.01□□□□□ -0.49
UBE3B-212ENST00000540230 ZNF736B4DX44 427 aaPredicted RBP12□□□□□ -0.49
UBE3B-212ENST00000540230 IGKV1D-33P01593 117 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 IGKV1-33P01594 117 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 GAPDHP04406 335 aaKnown RBP12□□□□□ -0.49
UBE3B-212ENST00000540230 ZNF137PP52743 207 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 HES1Q14469 280 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 HNF4GQ14541 408 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 TMEM30BQ3MIR4 351 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 C11orf88Q6PI97 169 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 MOB3BQ86TA1 216 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 THNSL2Q86YJ6 484 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 SETD6Q8TBK2 473 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
UBE3B-212ENST00000540230 RAB9BQ9NP90 201 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 JPT1Q9UK76 154 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 HSF4Q9ULV5 492 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
UBE3B-212ENST00000540230 LPLP06858 475 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 FAM106CPP0CH98 169 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 GADD45AP24522 165 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 VDAC2P45880 294 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-212ENST00000540230 HTD2P86397 168 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-212ENST00000540230 Q6ZTK2 550 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 ODF3L1Q8IXM7 274 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 LYG1Q8N1E2 194 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 IL1F10Q8WWZ1 152 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 AKR1E2Q96JD6 320 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 CHCHD6Q9BRQ6 235 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
UBE3B-212ENST00000540230 RAB22AQ9UL26 194 aa11.99□□□□□ -0.49
UBE3B-212ENST00000540230 TRBV6-6A0A0A6YYG2 114 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 M0QZ24 198 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 CLEC2LP0C7M8 214 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 CD28P10747 220 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 TMEM11P17152 192 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 OR56B1Q8NGI3 324 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 GALMQ96C23 342 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 ABHD14AQ9BUJ0 271 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 SSR3Q9UNL2 185 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 MOB4Q9Y3A3 225 aa11.98□□□□□ -0.49
UBE3B-212ENST00000540230 RAB27BO00194 218 aa11.97□□□□□ -0.49
UBE3B-212ENST00000540230 YPEL1O60688 119 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms