RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 EHFQ9NZC4 300 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SLC23A1Q9UHI7 598 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TBC1D24Q9ULP9 559 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 INSIG2Q9Y5U4 225 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SONP18583 2426 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TRBV6-7A0A0A0MS04 114 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 CTXN2P0C2S0 81 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR5H8P0DN80 308 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 FPR2P25090 351 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 LOXL3P58215 753 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 HTD2P86397 168 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GNMTQ14749 295 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 UTF1Q5T230 341 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR56B4Q8NH76 319 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 RAB9BQ9NP90 201 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR2S2Q9NQN1 319 aa15.51■□□□□ 0.07
TNFRSF1A-213ENST00000540022 M0R1W7 72 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DIRAS3O95661 229 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF735P0CB33 412 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 IGHV1-8P0DP01 117 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 HOXB4P17483 251 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DVL1P1P54792 670 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DCTN2Q13561 401 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 BTNL3Q6UXE8 466 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF782Q6ZMW2 699 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 KIR3DL3Q8N743 410 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SLC6A7Q99884 636 aa15.5■□□□□ 0.07
TNFRSF1A-213ENST00000540022 HSPA12AO43301 675 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 RBP4P02753 201 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 AMY2AP04746 511 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 NFYAP23511 347 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZBTB25P24278 435 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 NFYBP25208 207 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PPP1CCP36873 323 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DLX1P56177 255 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR10A7Q8NGE5 316 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR10V1Q8NGI7 309 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR10J5Q8NHC4 309 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DEDD2Q8WXF8 326 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GINS4Q9BRT9 223 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TMPRSS13Q9BYE2 586 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PARP12Q9H0J9 701 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PALMDQ9NP74 551 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GFOD1Q9NXC2 390 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GNG12Q9UBI6 72 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 JPT1Q9UK76 154 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 KPTNQ9Y664 436 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ABCA2Q9BZC7 2435 aa15.49■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TRAV20A0A0B4J274 112 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 FAM172BPA6NC97 362 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 IGHV3-7P01780 117 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 FAUP35544 74 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 CEACAM6P40199 344 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GZMKP49863 264 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PRB3Q04118 309 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 PAX8Q06710 450 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 KRTAP1-1Q07627 177 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 MEF2DQ14814 521 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF660Q6AZW8 331 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 H1FOOQ8IZA3 346 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR52M1Q8NGK5 317 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TMEM186Q96B77 213 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 C11orf54Q9H0W9 315 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SIRPDQ9H106 197 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 MCUBQ9NWR8 336 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 HIF1ANQ9NWT6 349 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 hCG_1809904A0A1W2PP81 198 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 A0A1W2PPE2 198 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 A0A1W2PR64 198 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 A0A1W2PRV1 198 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 LYRM1O43325 122 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TGFAP01135 160 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 IFNA6P05013 189 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 MMP9P14780 707 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 FCGR2CP31995 323 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TSPAN5P62079 268 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ASAH1Q13510 395 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TMEM30BQ3MIR4 351 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 MORN2Q502X0 79 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DCAF12L2Q5VW00 463 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DHRS11Q6UWP2 260 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 C1orf122Q6ZSJ8 110 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ARRDC1Q8N5I2 433 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR51S1Q8NGJ8 323 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 GIMAP1Q8WWP7 306 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 LEAP2Q969E1 77 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 C7orf50Q9BRJ6 194 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SUCNR1Q9BXA5 334 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 METTL8Q9H825 291 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SIRT7Q9NRC8 400 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 RDH8Q9NYR8 311 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 SESN1Q9Y6P5 492 aa15.48■□□□□ 0.07
TNFRSF1A-213ENST00000540022 YPEL1O60688 119 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 BTCP35070 178 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 METTL11BQ5VVY1 283 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR6F1Q8NGZ6 308 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 YPEL2Q96QA6 119 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF2Q9BSG1 426 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TOLLIPQ9H0E2 274 aa15.47■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ZNF69Q9UC07 566 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms