RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
VAMP1-206ENST00000538970 OR14A2Q96R54 314 aa9.79□□□□□ -0.84
VAMP1-206ENST00000538970 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
VAMP1-206ENST00000538970 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
VAMP1-206ENST00000538970 FAM90A10PA6NDY2 464 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 FAM90A7PA6NKC0 464 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 SC5DO75845 299 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 RCC1P18754 421 aaPredicted RBP9.78□□□□□ -0.84
VAMP1-206ENST00000538970 PSMB8P28062 276 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 SOX6P35712 828 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 LSAMPQ13449 338 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 FHL3Q13643 280 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 AWAT2Q6E213 333 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 LYPD6Q86Y78 171 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 C4orf3Q8WVX3 66 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 TMEM80Q96HE8 168 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 CYYR1Q96J86 154 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 KCTD7Q96MP8 289 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
VAMP1-206ENST00000538970 PEX16Q9Y5Y5 336 aa9.78□□□□□ -0.84
VAMP1-206ENST00000538970 DYNC2H1Q8NCM8 4307 aaKnown RBP9.78□□□□□ -0.84
VAMP1-206ENST00000538970 A0A1W2PPK0 400 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 LANCL1O43813 399 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 CA11O75493 328 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 MAS1P04201 325 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 MGMTP16455 207 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 ADARB1P78563 741 aaKnown RBP9.77□□□□□ -0.85
VAMP1-206ENST00000538970 MED21Q13503 144 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 GNMTQ14749 295 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 STEAP3Q658P3 488 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 CDH26Q8IXH8 852 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 Q96M66 194 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 PRR25Q96S07 402 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 SELENOIQ9C0D9 397 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 BANF2Q9H503 90 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 TAF9BQ9HBM6 251 aa9.77□□□□□ -0.85
VAMP1-206ENST00000538970 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.85
VAMP1-206ENST00000538970 CHCHD3Q9NX63 227 aaKnown RBP9.77□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.85
VAMP1-206ENST00000538970 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 CRTAPO75718 401 aaPredicted RBP9.76□□□□□ -0.85
VAMP1-206ENST00000538970 BAG2O95816 211 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 GLAP06280 429 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
VAMP1-206ENST00000538970 OR5H8P0DN80 308 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
VAMP1-206ENST00000538970 FUT3P21217 361 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 MYF6P23409 242 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 TAS2R43P59537 309 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 DOC2BQ14184 412 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 MMDQ15546 238 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 MORN2Q502X0 79 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 SIGIRRQ6IA17 410 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 ZNF554Q86TJ5 538 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 ODF3L1Q8IXM7 274 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 SETD9Q8NE22 299 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 MRPL30Q8TCC3 161 aaKnown RBP9.76□□□□□ -0.85
VAMP1-206ENST00000538970 CYGBQ8WWM9 190 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 GGHQ92820 318 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 DERL3Q96Q80 235 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 OR2S2Q9NQN1 319 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
VAMP1-206ENST00000538970 SCOCQ9UIL1 159 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
VAMP1-206ENST00000538970 PNMA8CA0A1B0GUJ8 204 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 UBE2QL1A1L167 161 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 PDCD6O75340 191 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 PPIFP30405 207 aaKnown RBP9.75□□□□□ -0.85
VAMP1-206ENST00000538970 PPP1CCP36873 323 aaKnown RBP9.75□□□□□ -0.85
VAMP1-206ENST00000538970 CAPGP40121 348 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 ECI1P42126 302 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 ACTBP60709 375 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 ST3GAL4Q11206 333 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 NKAPLQ5M9Q1 402 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 C6orf141Q5SZD1 244 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 TTC23Q5W5X9 447 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 C5orf24Q7Z6I8 188 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 NKAIN3Q8N8D7 197 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 OR11H1Q8NG94 326 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 OR52L2PQ8NGH6 319 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 UBE2E2Q96LR5 201 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 CHCHD6Q9BRQ6 235 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 MRPL20Q9BYC9 149 aaKnown RBP9.75□□□□□ -0.85
VAMP1-206ENST00000538970 KCNIP1Q9NZI2 227 aa9.75□□□□□ -0.85
VAMP1-206ENST00000538970 SACSQ9NZJ4 4579 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 EFCAB10A6NFE3 127 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 HLA-DRB1P01911 266 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 CD1AP06126 327 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 CNTFRP26992 372 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 HTD2P86397 168 aa9.74□□□□□ -0.85
VAMP1-206ENST00000538970 KIAA0141Q14154 515 aaPredicted RBP9.74□□□□□ -0.85
VAMP1-206ENST00000538970 LRRC36Q1X8D7 754 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms