RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 IGHV2-70P01814 119 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 ALDOBP05062 364 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 PGA5P0DJD9 388 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CALCBP10092 127 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 RPS2P15880 293 aaKnown RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SERPINA2P20848 420 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 MPZP25189 248 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 S100A11P31949 105 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CD80P33681 288 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 PMELP40967 661 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 PTGFRP43088 359 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 OR3A4PP47883 348 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CAPZA1P52907 286 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SEC61A1P61619 476 aaKnown RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 PDZK1IP1Q13113 114 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 ZMYND11Q15326 602 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 RAB11BQ15907 218 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SLC22A6Q4U2R8 563 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM155Q4W5P6 130 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 TMEM69Q5SWH9 247 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 FAM201AQ5SY85 155 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 PXDC1Q5TGL8 231 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 ZNF626Q68DY1 528 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 UNQ9370/PRO34162Q6UXP9 181 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 GLDNQ6ZMI3 551 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 DNM1P46Q6ZS02 220 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SLC36A1Q7Z2H8 476 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 HSD17B13Q7Z5P4 300 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CALHM1Q8IU99 346 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 TGIF2LYQ8IUE0 185 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CDH26Q8IXH8 852 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 C11orf53Q8IXP5 236 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 GCSAMQ8N6F7 178 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 ZSCAN4Q8NAM6 433 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 POC1AQ8NBT0 407 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 BEST4Q8NFU0 473 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 OR8B3Q8NGG8 313 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 OR6M1Q8NGM8 313 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 FCAMRQ8WWV6 532 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 RAB40AQ8WXH6 277 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 ST8SIA4Q92187 359 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 EMG1Q92979 244 aaKnown RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SLC25A38Q96DW6 304 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 OR8B2Q96RD0 313 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 NRIP2Q9BQI9 281 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SEC22CQ9BRL7 303 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 UQCC2Q9BRT2 126 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 TM2D2Q9BX73 214 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 REG4Q9BYZ8 158 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CHIAQ9BZP6 476 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 FGF23Q9GZV9 251 aaPredicted RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CST11Q9H112 138 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 METTL9Q9H1A3 318 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 WDR13Q9H1Z4 485 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 RHOFQ9HBH0 211 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 HRASLSQ9HDD0 168 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 DCAF16Q9NXF7 216 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 MIOXQ9UGB7 285 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 MRPS28Q9Y2Q9 187 aaKnown RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 CHD3Q12873 2000 aaKnown RBP3.58□□□□□ -1.84
SNHG1-208ENST00000538266 SPG11Q96JI7 2443 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 NAV2Q8IVL1 2488 aa3.58□□□□□ -1.84
SNHG1-208ENST00000538266 UNC79Q9P2D8 2635 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 FXYD6-FXYD2A0A087WZ82 144 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 IGHV4-61A0A0C4DH41 118 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 IFITM5A6NNB3 132 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CEACAM18A8MTB9 384 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 A8MXK9 166 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 SLC17A2O00624 439 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 RRHO14718 337 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 SH2D1BO14796 132 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 WNT9BO14905 357 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ADAM20O43506 726 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 NDUFB3O43676 98 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 UTP20O75691 2785 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CRTAPO75718 401 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ACTL6BO94805 426 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 OR2A4O95047 310 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 NDUFB6O95139 128 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CFDP00746 253 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GYPAP02724 150 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 NMBP08949 121 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 ACAA1P09110 424 aaPredicted RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CSF1P09603 554 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 UBBP0CG47 229 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GTF2F2P13984 249 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 PRKACAP17612 351 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CXCL2P19875 107 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 BCL3P20749 454 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 CPT2P23786 658 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 HTR2CP28335 458 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 RBMXP38159 391 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GABRA2P47869 451 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 SNU13P55769 128 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 RPL15P61313 204 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 GNB2P62879 340 aa3.57□□□□□ -1.84
SNHG1-208ENST00000538266 RPS27AP62979 156 aaKnown RBP3.57□□□□□ -1.84
SNHG1-208ENST00000538266 UBA52P62987 128 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms