RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 DMBX1Q8NFW5 382 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 LYPD6BQ8NI32 183 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 PLPPR1Q8TBJ4 325 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 EDARADDQ8WWZ3 215 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 ERGIC1Q969X5 290 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 LURAP1Q96LR2 239 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 SMIM3Q9BZL3 60 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 OPN3Q9H1Y3 402 aaPredicted RBP5.6□□□□□ -1.51
USP28-206ENST00000538224 HRH4Q9H3N8 390 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 UQCC1Q9NVA1 299 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 PPP1R14DQ9NXH3 145 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 COA4Q9NYJ1 87 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 OR14J1Q9UGF5 321 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 WASF3Q9UPY6 502 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 KPTNQ9Y664 436 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 WSB1Q9Y6I7 421 aa5.6□□□□□ -1.51
USP28-206ENST00000538224 INTS1Q8N201 2190 aaKnown RBP5.6□□□□□ -1.51
USP28-206ENST00000538224 H0YL77 283 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 TOR1AO14656 332 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 KLK10O43240 276 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 ZNHIT1O43257 154 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 SPINT2O43291 252 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 FBXO24O75426 580 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 IGHV3-13P01766 116 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 PRH1P02810 166 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 ADH4P08319 380 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 GLI4P10075 376 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 PSG2P11465 335 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 CEACAM8P31997 349 aaPredicted RBP5.59□□□□□ -1.51
USP28-206ENST00000538224 GLRXP35754 106 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 CFHR2P36980 270 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 CEACAM6P40199 344 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 LPAR6P43657 344 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 GABRA2P47869 451 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 KLF3P57682 345 aaPredicted RBP5.59□□□□□ -1.51
USP28-206ENST00000538224 POLR2GP62487 172 aaKnown RBP eCLIP5.59□□□□□ -1.51
USP28-206ENST00000538224 HBG1P69891 147 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 HBG2P69892 147 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 HTD2P86397 168 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 FOXF2Q12947 444 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 BTN1A1Q13410 526 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 ZNF273Q14593 569 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 TMEM30BQ3MIR4 351 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 MIDNQ504T8 468 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 ZNF66Q6ZN08 573 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 TMEM252Q8N6L7 170 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.59□□□□□ -1.51
USP28-206ENST00000538224 KDF1Q8NAX2 398 aaPredicted RBP5.59□□□□□ -1.51
USP28-206ENST00000538224 OR51H1Q8NH63 302 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 FAM57AQ8TBR7 257 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 NCOR1P1Q9H4R4 102 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 C19orf12Q9NSK7 152 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 OR1A1Q9P1Q5 309 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 CACFD1Q9UGQ2 172 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 RNF150Q9ULK6 438 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 MMP24Q9Y5R2 645 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 CUL9Q8IWT3 2517 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 TTC28Q96AY4 2481 aa5.59□□□□□ -1.51
USP28-206ENST00000538224 ZNF292O60281 2723 aa5.59□□□□□ -1.52
USP28-206ENST00000538224 A0A1B0GW64 132 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 IGSF23A1L1A6 192 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 SRRM5B3KS81 715 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 C12orf77C9JDV5 145 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 RNASEK-C17orf49H0YIS7 233 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 PRRG2O14669 202 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 ABCD4O14678 606 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 TSPAN4O14817 238 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 MGST3O14880 152 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 TNFSF12O43508 249 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 SYNGR2O43760 224 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 IFNA5P01569 189 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 HBE1P02100 147 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 CD5P06127 495 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 OR8U9P0C7N5 309 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 MUC1P15941 1255 aaPredicted RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 TNFSF4P23510 183 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 OR3A1P47881 315 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 SULT1A1P50225 295 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 FABP6P51161 128 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 ARHGDIBP52566 201 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 RELQ04864 619 aaPredicted RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 ZNF616Q08AN1 781 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 GTF3C1Q12789 2109 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 ALKBH6Q3KRA9 238 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 PRAMEF6Q5VXH4 476 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 SLC25A24Q6NUK1 477 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 Q6ZR03 302 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 MRGPRGQ86SM5 289 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 C11orf53Q8IXP5 236 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 LINC00518Q8N0U6 118 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 PRR18Q8N4B5 295 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 DRAM1Q8N682 238 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 OR8U1Q8NH10 309 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 CD300LFQ8TDQ1 290 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 LRRC29Q8WV35 223 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 GPR146Q96CH1 333 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 SNX22Q96L94 193 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 HSD17B10Q99714 261 aaKnown RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 ATP5SQ99766 215 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms