RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GPR146Q96CH1 333 aa13.17□□□□□ -0.3
MKS1-204ENST00000537529 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
MKS1-204ENST00000537529 SIGLEC5O15389 551 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 CEACAM8P31997 349 aaPredicted RBP13.16□□□□□ -0.3
MKS1-204ENST00000537529 GABRA2P47869 451 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 RAB5CP51148 216 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 COL10A1Q03692 680 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 BAXQ07812 192 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 AESQ08117 197 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 SPAG16Q8N0X2 631 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 TMEM252Q8N6L7 170 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 COQ2Q96H96 371 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
MKS1-204ENST00000537529 DUSP13Q9UII6 198 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 HBZP02008 142 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 DANCRP0C864 163 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
MKS1-204ENST00000537529 SRSF3P84103 164 aaKnown RBP13.16□□□□□ -0.3
MKS1-204ENST00000537529 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 SVBPQ8N300 66 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 OR10Z1Q8NGY1 313 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 NINJ1Q92982 152 aa13.16□□□□□ -0.3
MKS1-204ENST00000537529 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
MKS1-204ENST00000537529 F8W036 122 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 GLRXP35754 106 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.3
MKS1-204ENST00000537529 CLINT1Q14677 625 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 FAM90A1Q86YD7 464 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
MKS1-204ENST00000537529 TOLLIPQ9H0E2 274 aa13.15□□□□□ -0.3
MKS1-204ENST00000537529 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
MKS1-204ENST00000537529 CHST1O43916 411 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 NXPH3O95157 252 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 MUC1P15941 1255 aaPredicted RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 CAMLGP49069 296 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 RPS23P62266 143 aaKnown RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 TAGLNQ01995 201 aaKnown RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 C10orf91Q5T1B1 145 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 LYPD6BQ8NI32 183 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 MRGPRDQ8TDS7 321 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 LURAP1Q96LR2 239 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 UQCC1Q9NVA1 299 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 CARHSP1Q9Y2V2 147 aaKnown RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 RNF115Q9Y4L5 304 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 TFF1P04155 84 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 ADCYAP1P18509 176 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 OMGP23515 440 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 ASCL1P50553 236 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 ARHGDIBP52566 201 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
MKS1-204ENST00000537529 PAX5Q02548 391 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 ZNF273Q14593 569 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 MSMO1Q15800 293 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 COMMD1Q8N668 190 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 OR52L2PQ8NGH6 319 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 RAB40CQ96S21 281 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 SH3BGRL3Q9H299 93 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 METRNQ9UJH8 293 aa13.14□□□□□ -0.31
MKS1-204ENST00000537529 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 TSPAN4O14817 238 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 TMEM50AO95807 157 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 TSPAN15O95858 294 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 PRH1P02810 166 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 PRDX2P32119 198 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 CFHR2P36980 270 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 ASCL5Q7RTU5 278 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 CD177Q8N6Q3 437 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 SEC11CQ9BY50 192 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 OR2D2Q9H210 308 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 SEBOXQ9HB31 216 aaPredicted RBP13.13□□□□□ -0.31
MKS1-204ENST00000537529 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
MKS1-204ENST00000537529 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
MKS1-204ENST00000537529 RNASEK-C17orf49H0YIS7 233 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 EGR1P18146 543 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 GLIPR1P48060 266 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 DYNLT3P51808 116 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 ZNF616Q08AN1 781 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 STX12Q86Y82 276 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 OR5C1Q8NGR4 320 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 MEGF10Q96KG7 1140 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms