RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 S100PBPQ96BU1 408 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 PARP11Q9NR21 331 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 OR14J1Q9UGF5 321 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 RCL1Q9Y2P8 373 aaKnown RBP11.44□□□□□ -0.58
SMG6-203ENST00000536871 DOCK7Q96N67 2140 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 LGALS8O00214 317 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 ADAM20O43506 726 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
SMG6-203ENST00000536871 S100PP25815 95 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 IL2RGP31785 369 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 CEACAM6P40199 344 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 TESK1Q15569 626 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 SWI5Q1ZZU3 235 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 Q6ZR03 302 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 SPAG16Q8N0X2 631 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 OR1S2Q8NGQ3 325 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 SFT2D1Q8WV19 159 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 GINS3Q9BRX5 216 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 NCOR1P1Q9H4R4 102 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 LYRM2Q9NU23 88 aaPredicted RBP11.44□□□□□ -0.58
SMG6-203ENST00000536871 CFAP54Q96N23 3096 aa11.44□□□□□ -0.58
SMG6-203ENST00000536871 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 A8MXE2 369 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 SRRM5B3KS81 715 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 M0R1B8 84 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 GLI4P10075 376 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 FOLR2P14207 255 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 PAX6P26367 422 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 ZNF83P51522 516 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 F2RL1P55085 397 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 NKX6-1P78426 367 aaPredicted RBP11.43□□□□□ -0.58
SMG6-203ENST00000536871 PJVKQ0ZLH3 352 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 GUCA2BQ16661 112 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 FAM219AQ8IW50 185 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 ERGIC1Q969X5 290 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
SMG6-203ENST00000536871 WDFY4Q6ZS81 3184 aa11.43□□□□□ -0.58
SMG6-203ENST00000536871 EP300Q09472 2414 aaPredicted RBP11.43□□□□□ -0.58
SMG6-203ENST00000536871 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 PITX3O75364 302 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 ADH4P08319 380 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 CATR1Q13166 79 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 ASCL5Q7RTU5 278 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 MSL2Q9HCI7 577 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 OR1A1Q9P1Q5 309 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 LAMP3Q9UQV4 416 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 SPINT2O43291 252 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 PSPNO60542 156 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 GZMHP20718 246 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 GATA4P43694 442 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 HTD2P86397 168 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 DEFA5Q01523 94 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 EWSR1Q01844 656 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMG6-203ENST00000536871 PRAMEF6Q5VXH4 476 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 LILRB2Q8N423 598 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 RNASE11Q8TAA1 199 aaKnown RBP11.42□□□□□ -0.58
SMG6-203ENST00000536871 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 ABHD17AQ96GS6 310 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 LUZP4Q9P127 313 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 KCNS2Q9ULS6 477 aa11.42□□□□□ -0.58
SMG6-203ENST00000536871 TNFSF4P23510 183 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 OR3A1P47881 315 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 RPL23AP62750 156 aaKnown RBP11.41□□□□□ -0.58
SMG6-203ENST00000536871 RBPJQ06330 500 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 KRBOX4Q5JUW0 171 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 C10orf91Q5T1B1 145 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 ZNF826PQ6ZT77 177 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 EDARADDQ8WWZ3 215 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 SNX22Q96L94 193 aa11.41□□□□□ -0.58
SMG6-203ENST00000536871 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
SMG6-203ENST00000536871 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 C12orf77C9JDV5 145 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 MED6O75586 246 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 OR8U9P0C7N5 309 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 SPP1P10451 314 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 PRDX2P32119 198 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 GABRA2P47869 451 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 CAV2P51636 162 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 TAS2R30P59541 319 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 COL10A1Q03692 680 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 TMEM108Q6UXF1 575 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 OR8U1Q8NH10 309 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 OR51H1Q8NH63 302 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 DIRC2Q96SL1 478 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 GSN-AS1Q9NRJ2 163 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 UFSP2Q9NUQ7 469 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 DUSP13Q9UII6 198 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 ZDHHC8Q9ULC8 765 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.58
SMG6-203ENST00000536871 TMEM218A2RU14 115 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms