RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OPN1SWP03999 348 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 PPP1CCP36873 323 aaKnown RBP2.66□□□□□ -1.98
PRKDC-208ENST00000536710 SMAGPQ0VAQ4 97 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 PDK2Q15119 407 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 MFSD8Q8NHS3 518 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 MED18Q9BUE0 208 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 ZNF426Q9BUY5 554 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 GTSF1LQ9H1H1 148 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 C11orf49Q9H6J7 331 aa2.66□□□□□ -1.98
PRKDC-208ENST00000536710 NUP153P49790 1475 aaKnown RBP2.65□□□□□ -1.98
PRKDC-208ENST00000536710 ARAP3Q8WWN8 1544 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 E7EQL1 145 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 ATP8B1O43520 1251 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 ZNF22P17026 224 aaPredicted RBP2.65□□□□□ -1.99
PRKDC-208ENST00000536710 CFL1P23528 166 aaKnown RBP2.65□□□□□ -1.99
PRKDC-208ENST00000536710 PSMB3P49720 205 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 CLDN12P56749 244 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 ACTBP60709 375 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 ACTG1P63261 375 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 BSPH1Q075Z2 132 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 FAM9CQ8IZT9 166 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 YIPF7Q8N8F6 280 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 OR52E4Q8NGH9 312 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 LMX1AQ8TE12 382 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 TNFAIP8L1Q8WVP5 186 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 LLPHQ9BRT6 129 aaKnown RBP2.65□□□□□ -1.99
PRKDC-208ENST00000536710 MRPL16Q9NX20 251 aaKnown RBP2.65□□□□□ -1.99
PRKDC-208ENST00000536710 LINC00527Q9UJ94 153 aa2.65□□□□□ -1.99
PRKDC-208ENST00000536710 SHANK1Q9Y566 2161 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 VWA8A3KMH1 1905 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 IGLV10-54A0A075B6I4 117 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 H3BSA7 217 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 ZW10O43264 779 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CDS2O95674 445 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CTSGP08311 255 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CD99P14209 185 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 OR8G1Q15617 311 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 TBC1D28Q2M2D7 210 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 HLA-DRB5Q30154 266 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 HCP5Q6MZN7 132 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 TMPPEQ6ZT21 453 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 SCXQ7RTU7 201 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 PLCZ1Q86YW0 608 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 TMEM75Q8N9X5 138 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CYGBQ8WWM9 190 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 RAD51AP1Q96B01 352 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 DRC3Q9H069 523 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 HDHD2Q9H0R4 259 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 DNAJC12Q9UKB3 198 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 PSMD13Q9UNM6 376 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CARHSP1Q9Y2V2 147 aaKnown RBP2.64□□□□□ -1.99
PRKDC-208ENST00000536710 OR51B4Q9Y5P0 310 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 SNX10Q9Y5X0 201 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 CLUHO75153 1309 aa2.64□□□□□ -1.99
PRKDC-208ENST00000536710 TP53I11O14683 189 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 ITGB1BP1O14713 200 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 DENRO43583 198 aaKnown RBP2.63□□□□□ -1.99
PRKDC-208ENST00000536710 HBZP02008 142 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 COTL1Q14019 142 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 PDGFRLQ15198 375 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 C4orf26Q17RF5 130 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 SPATA31B1PQ5VZV4 182 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 SCGB1D4Q6XE38 83 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 RIBC1Q8N443 379 aaPredicted RBP2.63□□□□□ -1.99
PRKDC-208ENST00000536710 NATD1Q8N6N6 113 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 SUN5Q8TC36 379 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 IMP3Q9NV31 184 aaKnown RBP2.63□□□□□ -1.99
PRKDC-208ENST00000536710 FAM206AQ9NX38 181 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 TAS2R9Q9NYW1 312 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 VPREB3Q9UKI3 123 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 C15orf41Q9Y2V0 281 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 FIS1Q9Y3D6 152 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 ATP6V1DQ9Y5K8 247 aa2.63□□□□□ -1.99
PRKDC-208ENST00000536710 A8MWP6 167 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 STX10O60499 249 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 HPGDSO60760 199 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 OR4A8P0C604 315 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 OR13C7P0DN81 318 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 AKR1C2P52895 323 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 DRAM2Q6UX65 266 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 CD302Q8IX05 232 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 PPCDCQ96CD2 204 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 RAD50Q92878 1312 aa2.62□□□□□ -1.99
PRKDC-208ENST00000536710 DNMT1P26358 1616 aaKnown RBP2.61□□□□□ -1.99
PRKDC-208ENST00000536710 CRB1P82279 1406 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 A0A1W2PNM2 257 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 IGSF23A1L1A6 192 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 GOLGA8KD6RF30 607 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 GOLGA8MH3BSY2 632 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 STK16O75716 305 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 CRYGDP07320 174 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 UGT2B7P16662 529 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 DAD1P61803 113 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 ERMNQ8TAM6 284 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 CD200R1Q8TD46 325 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 ABHD14BQ96IU4 210 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 MROQ9BYG7 248 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 UBQLN4Q9NRR5 601 aa2.61□□□□□ -1.99
PRKDC-208ENST00000536710 SPANXB1Q9NS25 103 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms