RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ARFRP1Q13795 201 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 ARL6IP1Q15041 203 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 ZNF260Q3ZCT1 412 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 HACD4Q5VWC8 232 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 IZUMO1Q8IYV9 350 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 DTX3Q8N9I9 347 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 AP3S1Q92572 193 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 S100A16Q96FQ6 103 aaKnown RBP9.79□□□□□ -0.84
CHD4-203ENST00000535717 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 ESM1Q9NQ30 184 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 DIABLOQ9NR28 239 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 GFOD1Q9NXC2 390 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 ZNRD1Q9P1U0 126 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 PSG11Q9UQ72 335 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 FAM96BQ9Y3D0 163 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 A0A0A6YYJ9 748 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 J3QR06 171 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 TOR1AO14656 332 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 XRCC3O43542 346 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 TCF21O43680 179 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 SSX5O60225 188 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 VENTXO95231 258 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 APOA1P02647 267 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 FBP1P09467 338 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 ELK1P19419 428 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 PAX6P26367 422 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 SOX6P35712 828 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 TALDO1P37837 337 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 HILS1P60008 231 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 SRSF2Q01130 221 aaKnown RBP9.78□□□□□ -0.84
CHD4-203ENST00000535717 TRIM16LQ309B1 348 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 MZT2AQ6P582 158 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 RBMS3Q6XE24 437 aaKnown RBP9.78□□□□□ -0.84
CHD4-203ENST00000535717 Q6YL49 198 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 BEND2Q8NDZ0 799 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 OR52L2PQ8NGH6 319 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 OR4P4Q8NGL7 312 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 OR9G1Q8NH87 305 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 ZNF596Q8TC21 504 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 NUDCD2Q8WVJ2 157 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 CMTM3Q96MX0 182 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 AUNIPQ9H7T9 357 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 AKIP1Q9NQ31 210 aa9.78□□□□□ -0.84
CHD4-203ENST00000535717 CCDC59Q9P031 241 aaKnown RBP9.78□□□□□ -0.84
CHD4-203ENST00000535717 ZNF230Q9UIE0 474 aaPredicted RBP9.78□□□□□ -0.84
CHD4-203ENST00000535717 TBL2Q9Y4P3 447 aaKnown RBP9.78□□□□□ -0.84
CHD4-203ENST00000535717 A0A1W2PPE3 182 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 TRDCB7Z8K6 153 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MELTFP08582 738 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 SCTP09683 121 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 HTR1DP28221 377 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 GNG10P50151 68 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 PRRX1P54821 245 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 HLA-DRB3P79483 266 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 HTD2P86397 168 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 BAMBIQ13145 260 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 GNMTQ14749 295 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 PNLIPRP3Q17RR3 467 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 HLA-DRB5Q30154 266 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MINOS1Q5TGZ0 78 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 ZDHHC22Q8N966 263 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 OR10V1Q8NGI7 309 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MAFIPQ8WZ33 124 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 GALMQ96C23 342 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 DCUN1D5Q9BTE7 237 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MMP28Q9H239 520 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 OR2S2Q9NQN1 319 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 GNG12Q9UBI6 72 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MGAT4AQ9UM21 535 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 MINOS1-NBL1R4GNA1 71 aa9.77□□□□□ -0.85
CHD4-203ENST00000535717 IGKV1-6A0A0C4DH72 117 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 DNAJC9-AS1A6NH13 148 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 CTDSP2O14595 271 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 SLC31A2O15432 143 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 HOXA3O43365 443 aaPredicted RBP9.76□□□□□ -0.85
CHD4-203ENST00000535717 IGHV4-59P01825 116 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 PTHLHP12272 177 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 DTYMKP23919 212 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 PPP1CCP36873 323 aaKnown RBP9.76□□□□□ -0.85
CHD4-203ENST00000535717 TAS2R20P59543 309 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 GNG2P59768 71 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 PITPNAQ00169 270 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 SLC9A3R2Q15599 337 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 SSX2Q16385 188 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 MORN2Q502X0 79 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 TMEM69Q5SWH9 247 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 C8orf31Q8N9H6 132 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 ZNF439Q8NDP4 499 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 IL1F10Q8WWZ1 152 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 MALSU1Q96EH3 234 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 JMJD8Q96S16 334 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 SLIRPQ9GZT3 109 aaKnown RBP9.76□□□□□ -0.85
CHD4-203ENST00000535717 MEGF9Q9H1U4 602 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms