RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
CCDC60-202ENST00000535685 MYDGFQ969H8 173 aa8.55□□□□□ -1.04
CCDC60-202ENST00000535685 MND1Q9BWT6 205 aa8.55□□□□□ -1.04
CCDC60-202ENST00000535685 LSM2Q9Y333 95 aaKnown RBP8.55□□□□□ -1.04
CCDC60-202ENST00000535685 A0A1W2PPK0 400 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 C12orf77C9JDV5 145 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 H0YHG0 523 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 SDCBPO00560 298 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-202ENST00000535685 SPINT2O43291 252 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 IGKV1D-33P01593 117 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 IGKV1-33P01594 117 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 IGHV3-7P01780 117 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 MAS1P04201 325 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 GNG10P50151 68 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
CCDC60-202ENST00000535685 IRF3Q14653 427 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 LTC4SQ16873 150 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 ACSM3Q53FZ2 586 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 SYT6Q5T7P8 510 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-202ENST00000535685 TGIF2LXQ8IUE1 241 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 OR8H1Q8NGG4 311 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 OR2T10Q8NGZ9 312 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 NEK7Q8TDX7 302 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 CHAC2Q8WUX2 184 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 RTN4IP1Q8WWV3 396 aaPredicted RBP8.54□□□□□ -1.04
CCDC60-202ENST00000535685 SELENOIQ9C0D9 397 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 CST11Q9H112 138 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 ETAA1Q9NY74 926 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 TRAPPC2LQ9UL33 140 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 LRRC42Q9Y546 428 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 PEX16Q9Y5Y5 336 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 SORL1Q92673 2214 aa8.54□□□□□ -1.04
CCDC60-202ENST00000535685 PNMA8CA0A1B0GUJ8 204 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 PSMB11A5LHX3 300 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 LANCL1O43813 399 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 PDCD6O75340 191 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 DUS4LO95620 317 aaKnown RBP8.53□□□□□ -1.04
CCDC60-202ENST00000535685 HBZP02008 142 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 VHLP40337 213 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 SLC35A2P78381 396 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 HTD2P86397 168 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 HES1Q14469 280 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 SPHARQ15513 63 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 CT45A1Q5HYN5 189 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 GLT8D1Q68CQ7 371 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 LRRTM1Q86UE6 522 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 CT45A3Q8NHU0 189 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 CCDC107Q8WV48 283 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 BANF2Q9H503 90 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 DUSP21Q9H596 190 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 ISYNA1Q9NPH2 558 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 PLSCR3Q9NRY6 295 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 ZFP57Q9NU63 452 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 LIN7CQ9NUP9 197 aaKnown RBP8.53□□□□□ -1.04
CCDC60-202ENST00000535685 NECAP2Q9NVZ3 263 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 SCN3BQ9NY72 215 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
CCDC60-202ENST00000535685 A0A1W2PPE3 182 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 SH2D7A6NKC9 451 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 CRTAPO75718 401 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 MOSP00540 346 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 UCHL1P09936 223 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 PF4V1P10720 104 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 RCC1P18754 421 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 SRMP19623 302 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 ZNF134P52741 427 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 GABPB1Q06547 395 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 TPBGQ13641 420 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 MORN2Q502X0 79 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 C9orf152Q5JTZ5 239 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 Q6ZPA2 131 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 MOB3BQ86TA1 216 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 Q8N9W7 124 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 OR4K15Q8NH41 348 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 OR1L1Q8NH94 360 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 MRPL30Q8TCC3 161 aaKnown RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 PHF21AQ96BD5 680 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 TM2D1Q9BX74 207 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 ABCG5Q9H222 651 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 TAF9BQ9HBM6 251 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 NKX1-2Q9UD57 310 aaPredicted RBP8.52□□□□□ -1.05
CCDC60-202ENST00000535685 JPT1Q9UK76 154 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 U3KQE9 123 aa8.52□□□□□ -1.05
CCDC60-202ENST00000535685 IGHV3-43A0A0B4J1X8 118 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 TMEM14DPA8MWL7 114 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 PTGES3LE9PB15 166 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 AP4M1O00189 453 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 SLC22A1O15245 554 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 SLC31A2O15432 143 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 YPEL1O60688 119 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 IGHV3-43DP0DP04 118 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 CHATP28329 748 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 RPL23AP62750 156 aaKnown RBP8.51□□□□□ -1.05
CCDC60-202ENST00000535685 RPS27AP62979 156 aaKnown RBP8.51□□□□□ -1.05
CCDC60-202ENST00000535685 SLC35B1P78383 322 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 QRFPP83859 136 aa8.51□□□□□ -1.05
CCDC60-202ENST00000535685 HNF4GQ14541 408 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms