RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 FAM90A10PA6NDY2 464 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 TXNL1O43396 289 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 LANCL1O43813 399 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 GPX5O75715 221 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 RPS11P62280 158 aaKnown RBP eCLIP14□□□□□ -0.17
UBXN1-216ENST00000533908 RUNX1Q01196 453 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 GNMTQ14749 295 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 PAK1IP1Q9NWT1 392 aaPredicted RBP14□□□□□ -0.17
UBXN1-216ENST00000533908 BABAM2Q9NXR7 383 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 ETAA1Q9NY74 926 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 CLEC2DQ9UHP7 191 aa14□□□□□ -0.17
UBXN1-216ENST00000533908 MCRIP1C9JLW8 97 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 ATP6V0E1O15342 81 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 SPINT2O43291 252 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF780AO75290 641 aaPredicted RBP13.99□□□□□ -0.17
UBXN1-216ENST00000533908 RIPK1Q13546 671 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 MORN2Q502X0 79 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 STEAP3Q658P3 488 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 SIGIRRQ6IA17 410 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 RAB12Q6IQ22 244 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 STX19Q8N4C7 294 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 OR52L2PQ8NGH6 319 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 GHSRQ92847 366 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 MUL1Q969V5 352 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 OR51J1Q9H342 316 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 BANF2Q9H503 90 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 SMAD5-AS1Q9Y6J3 95 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 SORL1Q92673 2214 aa13.99□□□□□ -0.17
UBXN1-216ENST00000533908 IGHV7-81A0A0B4J1V7 117 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 A0A1W2PPK0 400 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 LY86O95711 162 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 ACTBP60709 375 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 MMDQ15546 238 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 CASC10Q5T4H9 136 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 DMKNQ6E0U4 476 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-216ENST00000533908 GLIPR1L1Q6UWM5 242 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 OVCH2Q7RTZ1 564 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 LYPD6Q86Y78 171 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 MUC7Q8TAX7 377 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 SMIM19Q96E16 107 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 NABP2Q9BQ15 211 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 CHCHD6Q9BRQ6 235 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
UBXN1-216ENST00000533908 ANKRD60Q9BZ19 345 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 ALX4Q9H161 411 aaPredicted RBP13.98□□□□□ -0.17
UBXN1-216ENST00000533908 TAF9BQ9HBM6 251 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 OR2S2Q9NQN1 319 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 VSIG4Q9Y279 399 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 MRPS28Q9Y2Q9 187 aaKnown RBP13.98□□□□□ -0.17
UBXN1-216ENST00000533908 PEX16Q9Y5Y5 336 aa13.98□□□□□ -0.17
UBXN1-216ENST00000533908 UBE2QL1A1L167 161 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 SC5DO75845 299 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 OR8U8P0C7N1 319 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 RAB9AP51151 201 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 INSL3P51460 131 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 C6orf183Q5T699 404 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 TMEM65Q6PI78 240 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 ZFP41Q8N8Y5 198 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 MINDY2Q8NBR6 621 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 DLX4Q92988 240 aaPredicted RBP13.97□□□□□ -0.17
UBXN1-216ENST00000533908 SPACA1Q9HBV2 294 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 MBNL3Q9NUK0 354 aaKnown RBP13.97□□□□□ -0.17
UBXN1-216ENST00000533908 GAR1Q9NY12 217 aaKnown RBP13.97□□□□□ -0.17
UBXN1-216ENST00000533908 FBXO7Q9Y3I1 522 aa13.97□□□□□ -0.17
UBXN1-216ENST00000533908 TRBV5-7A0A0A0MS05 114 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 SOX15O60248 233 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 HLA-DRB1P01911 266 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 DCKP27707 260 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 BLVRBP30043 206 aaPredicted RBP13.96□□□□□ -0.17
UBXN1-216ENST00000533908 PPP1CCP36873 323 aaKnown RBP13.96□□□□□ -0.17
UBXN1-216ENST00000533908 OR3A3P47888 321 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 GPR176Q14439 515 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 TMEM30BQ3MIR4 351 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 C19orf54Q5BKX5 351 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 ZFP1Q6P2D0 407 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 TMPRSS11AQ6ZMR5 421 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 ZNF485Q8NCK3 441 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 CASTOR1Q8WTX7 329 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 MRPS24Q96EL2 167 aaKnown RBP13.96□□□□□ -0.17
UBXN1-216ENST00000533908 PGLYRP3Q96LB9 341 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 RDH12Q96NR8 316 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 RCHY1Q96PM5 261 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 C9orf16Q9BUW7 83 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 SELENOIQ9C0D9 397 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 PARP11Q9NR21 331 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 TPSG1Q9NRR2 321 aa13.96□□□□□ -0.17
UBXN1-216ENST00000533908 OVOL1O14753 267 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 SPNP16150 400 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 SLURP1P55000 103 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 NDPQ00604 133 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 C5orf64Q2M2E5 130 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 Q499Y3 187 aa13.95□□□□□ -0.18
UBXN1-216ENST00000533908 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
UBXN1-216ENST00000533908 ISYNA1Q9NPH2 558 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms