RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PSG5Q15238 335 aa6.92□□□□□ -1.3
CSRP1-218ENST00000533402 OTPQ5XKR4 325 aa6.92□□□□□ -1.3
CSRP1-218ENST00000533402 THYN1Q9P016 225 aa6.92□□□□□ -1.3
CSRP1-218ENST00000533402 UFC1Q9Y3C8 167 aa6.92□□□□□ -1.3
CSRP1-218ENST00000533402 LRP12Q9Y561 859 aa6.92□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM262E9PQX1 116 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SYNGR2O43760 224 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 GCM2O75603 506 aaPredicted RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SLCO2B1O94956 709 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 H2BFSP57053 126 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 RND3P61587 244 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 MICBQ29980 383 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM52BQ4KMG9 183 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 DMRTC1Q5HYR2 192 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 MRPL24Q96A35 216 aaKnown RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 JMJD8Q96S16 334 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 RSPO3Q9BXY4 272 aaPredicted RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TUBA4BQ9H853 241 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TCRBV5S1A1TA0A578 114 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 PRR35P0CG20 571 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 NTHL1P78549 312 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 MMDQ15546 238 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM240Q5SV17 173 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CD300LDQ6UXZ3 194 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SLC25A26Q70HW3 274 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 GALMQ96C23 342 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CACNA1GO43497 2377 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TRBV9A0A0B4J1U6 114 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 M0R1B8 84 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TYMSP04818 313 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 HMGA2P52926 109 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CLDN18P56856 261 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 FMODQ06828 376 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 DMKNQ6E0U4 476 aaPredicted RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 LIMS2Q7Z4I7 341 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 PDPNQ86YL7 162 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 C5orf30Q96GV9 206 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ZNF48Q96MX3 618 aaPredicted RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TIMP4Q99727 224 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CYSLTR1Q9Y271 337 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ANAPC1Q9H1A4 1944 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 GFRA3O60609 400 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 APOBEC1P41238 236 aaKnown RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 EFNB1P98172 346 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CLEC2AQ6UVW9 174 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 DLK2Q6UY11 383 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM204Q9BSN7 226 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CDC14BO60729 498 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 AMY1AP04745 511 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 GALNSP34059 522 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SERF2P84101 59 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 LHX8Q68G74 356 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 MFRPQ9BY79 579 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 GLRX2Q9NS18 164 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SPRY1O43609 319 aaPredicted RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 NDUFB4O95168 129 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 IGLV3-25P01717 112 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 UNQ9370/PRO34162Q6UXP9 181 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 OR4P4Q8NGL7 312 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 DNASE2BQ8WZ79 361 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ST6GALNAC6Q969X2 333 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 CHST5Q9GZS9 411 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SH3BGRL3Q9H299 93 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 SLC26A1Q9H2B4 701 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 ESDP10768 282 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 VDAC1P21796 283 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 UBE2V1Q13404 147 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM215Q68D42 235 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 PP6455Q8WZ26 134 aa6.91□□□□□ -1.3
CSRP1-218ENST00000533402 H0YGG7 62 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 ACTL6AO96019 429 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 PPICP45877 212 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 ZXDAP98168 799 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 COL10A1Q03692 680 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 TCTN1Q2MV58 587 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 TNFSF11O14788 317 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 CD3EP07766 207 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 PRICKLE4Q2TBC4 344 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 SHISA6Q6ZSJ9 500 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 MSRB3Q8IXL7 192 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 CCL27Q9Y4X3 112 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 PPIAL4DF5H284 164 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 PRDX4Q13162 271 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 HIKESHIQ53FT3 197 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 ZNF774Q6NX45 483 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 RND1Q92730 232 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 TMEM186Q96B77 213 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 KTI12Q96EK9 354 aaPredicted RBP6.9□□□□□ -1.3
CSRP1-218ENST00000533402 SGK494Q96LW2 274 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 FANCMQ8IYD8 2048 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms