RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 COX5AP20674 150 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 FAM53AQ6NSI3 398 aaPredicted RBP12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 OR2G3Q8NGZ4 309 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 EIF5A2Q9GZV4 153 aaKnown RBP12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 FZR1Q9UM11 496 aa12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 STRAPQ9Y3F4 350 aaKnown RBP12.94□□□□□ -0.34
CACNA1E-208ENST00000533229 H3BP45 60 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 HAND1O96004 215 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 S100GP29377 79 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 CEACAM6P40199 344 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 AKR1D1P51857 326 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 RUNX1Q01196 453 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 MOB1BQ7L9L4 216 aa12.93□□□□□ -0.34
CACNA1E-208ENST00000533229 TRAV17A0A0B4J275 112 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF98A6NK75 572 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 C1QTNF9BB2RNN3 333 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 GPR37O15354 613 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 WDR1O75083 606 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 IGKV1-5P01602 117 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 CCL20P78556 96 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 HMGN3Q15651 99 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 Q6ZR03 302 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 OR8G5Q8NG78 346 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 DKK4Q9UBT3 224 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 PRR14LQ5THK1 2151 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 A0A1B0GU03 582 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 CNOT4O95628 575 aaKnown RBP12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 WNT2P09544 360 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 CECR9P0C854 216 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 MMP9P14780 707 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 AKR1C3P42330 323 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 RAB13P51153 203 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 DEFB109BQ30KR1 87 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 ZFP82Q8N141 532 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 COMMD1Q8N668 190 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 FBXO7Q9Y3I1 522 aa12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 RBM7Q9Y580 266 aaKnown RBP12.92□□□□□ -0.34
CACNA1E-208ENST00000533229 MEX3AA1L020 520 aaKnown RBP12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 TMEM210A6NLX4 147 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 WRBO00258 174 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 PEA15Q15121 130 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 AKIRIN2Q53H80 203 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 PRAMEF6Q5VXH4 476 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 DRAM1Q8N682 238 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 C2CD4CQ8TF44 421 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 CACNG5Q9UF02 275 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 KCNS2Q9ULS6 477 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 TNFSF13O75888 250 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 CRYBA1P05813 215 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 SLC25A6P12236 298 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 HOXA1P49639 335 aaPredicted RBP12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 FABP6P51161 128 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 BAXQ07812 192 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 ACSF3Q4G176 576 aaPredicted RBP12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 ZNF610Q8N9Z0 462 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 OR1L1Q8NH94 360 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 SARAFQ96BY9 339 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 RARRES2Q99969 163 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 KPTNQ9Y664 436 aa12.91□□□□□ -0.34
CACNA1E-208ENST00000533229 PRR33A8MZF0 331 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 TXNL1O43396 289 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 HOXC12P31275 282 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 CTAG1AP78358 180 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 AESQ08117 197 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 SPSB3Q6PJ21 355 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 OPN3Q9H1Y3 402 aaPredicted RBP12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 UFSP2Q9NUQ7 469 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 COA4Q9NYJ1 87 aa12.9□□□□□ -0.34
CACNA1E-208ENST00000533229 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 OR3A1P47881 315 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 TMEM267Q0VDI3 215 aaPredicted RBP12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 SEM1Q6ZVN7 128 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 RNF150Q9ULK6 438 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 COLCA2A8K830 154 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 PTBP3O95758 552 aaKnown RBP12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 COQ2Q96H96 371 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 C12orf57Q99622 126 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 ATP5SQ99766 215 aa12.89□□□□□ -0.35
CACNA1E-208ENST00000533229 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
CACNA1E-208ENST00000533229 A6NLC8 198 aa12.88□□□□□ -0.35
CACNA1E-208ENST00000533229 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
CACNA1E-208ENST00000533229 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
CACNA1E-208ENST00000533229 CGAP01215 116 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms