RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 POM121CA8CG34 1229 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 CHST1O43916 411 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 SNRPBP14678 240 aaKnown RBP15.96■□□□□ 0.15
CPSF1-209ENST00000532725 MADCAM1Q13477 382 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 DIAPH2-AS1Q14236 149 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 MORN2Q502X0 79 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 CT45A1Q5HYN5 189 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 C3orf56Q8N813 242 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 OR52L2PQ8NGH6 319 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 OR10X1Q8NGY0 326 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 CT45A3Q8NHU0 189 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 LINC01006Q8NI28 216 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 FUNDC2Q9BWH2 189 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 C16orf95Q9H693 158 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 BEX1Q9HBH7 125 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 CHMP1AQ9HD42 196 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-209ENST00000532725 RAB18Q9NP72 206 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 GNG12Q9UBI6 72 aa15.96■□□□□ 0.15
CPSF1-209ENST00000532725 ANK2Q01484 3957 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 CLPSL1A2RUU4 121 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 SLC31A2O15432 143 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 BRS3P32247 399 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 RPS19P39019 145 aaKnown RBP15.95■□□□□ 0.14
CPSF1-209ENST00000532725 LSM3P62310 102 aaKnown RBP15.95■□□□□ 0.14
CPSF1-209ENST00000532725 STEAP3Q658P3 488 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 SLC25A48Q6ZT89 311 aaKnown RBP15.95■□□□□ 0.14
CPSF1-209ENST00000532725 OR10V1Q8NGI7 309 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 RPEQ96AT9 228 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 GALMQ96C23 342 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 CMSS1Q9BQ75 279 aaKnown RBP15.95■□□□□ 0.14
CPSF1-209ENST00000532725 ZNF747Q9BV97 191 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 ATG5Q9H1Y0 275 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 Q9N2K0 584 aa15.95■□□□□ 0.14
CPSF1-209ENST00000532725 FAM90A9PA6NNJ1 464 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 GNB3P16520 340 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 CD24P25063 80 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 LY6G6FQ5SQ64 297 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 IDNKQ5T6J7 187 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 CCDC144NLQ6NUI1 221 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 MOB1BQ7L9L4 216 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 TMEM219Q86XT9 240 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 SETD6Q8TBK2 473 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 ST6GALNAC6Q969X2 333 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 C12orf4Q9NQ89 552 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 JPT1Q9UK76 154 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 PITPNC1Q9UKF7 332 aa15.94■□□□□ 0.14
CPSF1-209ENST00000532725 MFNGO00587 321 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 YPEL1O60688 119 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 TMEM127O75204 238 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 HIST1H1DP16402 221 aaKnown RBP15.93■□□□□ 0.14
CPSF1-209ENST00000532725 MNDAP41218 407 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 RAB7AP51149 207 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 ARHGDIBP52566 201 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 SCAND1P57086 179 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 GNMTQ14749 295 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 OR5H6Q8NGV6 325 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 LGALS14Q8TCE9 139 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 TOMM40LQ969M1 308 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 YPEL2Q96QA6 119 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 ABRACLQ9P1F3 81 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 MGAT4AQ9UM21 535 aa15.93■□□□□ 0.14
CPSF1-209ENST00000532725 A0A1W2PPI3 338 aa15.92■□□□□ 0.14
CPSF1-209ENST00000532725 PPP1CCP36873 323 aaKnown RBP15.92■□□□□ 0.14
CPSF1-209ENST00000532725 KIR2DS4P43632 304 aa15.92■□□□□ 0.14
CPSF1-209ENST00000532725 ZNF816Q0VGE8 651 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-209ENST00000532725 FBLN7Q53RD9 439 aa15.92■□□□□ 0.14
CPSF1-209ENST00000532725 THNSL2Q86YJ6 484 aa15.92■□□□□ 0.14
CPSF1-209ENST00000532725 MRPS26Q9BYN8 205 aaKnown RBP15.92■□□□□ 0.14
CPSF1-209ENST00000532725 A0A075B6Q4 140 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 SERPINE3A8MV23 424 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 TIMM23O14925 209 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 GAPDHP04406 335 aaKnown RBP15.91■□□□□ 0.14
CPSF1-209ENST00000532725 TFAP2AP05549 437 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 SCTP09683 121 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 CD3GP09693 182 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 ALDH3B2P48448 385 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 ZNF137PP52743 207 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 CDNFQ49AH0 187 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 CROCCP3Q8IVE0 287 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 OR8H3Q8N146 312 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 DRAM1Q8N682 238 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 IL1F10Q8WWZ1 152 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 CFHR4Q92496 578 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 RANBP3Q9H6Z4 567 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-209ENST00000532725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.91■□□□□ 0.14
CPSF1-209ENST00000532725 ELF5Q9UKW6 265 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-209ENST00000532725 RNF114Q9Y508 228 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 ETV7Q9Y603 341 aa15.91■□□□□ 0.14
CPSF1-209ENST00000532725 HSD17B6O14756 317 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 RGS11O94810 467 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 PROK1P58294 105 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 NCS1P62166 190 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 HLA-DRB3P79483 266 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 HABP2Q14520 560 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-209ENST00000532725 ARL6IP1Q15041 203 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 ANKRD13BQ86YJ7 626 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 SLC25A38Q96DW6 304 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 NPFFR1Q9GZQ6 430 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 RHBDL2Q9NX52 303 aa15.9■□□□□ 0.14
CPSF1-209ENST00000532725 SPATA2Q9UM82 520 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms