RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	TRBV5-7	A0A0A0MS05	114 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504		K7EQM0	130 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PRB1	P04280	392 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	F2R	P25116	425 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	HTR1D	P28221	377 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SSC4D	Q8WTU2	575 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	RBPMS	Q93062	196 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SLA2	Q9H6Q3	261 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PARP11	Q9NR21	331 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	IGHV3-21	A0A0B4J1V1	117 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CST4	P01036	141 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CHAT	P28329	748 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ACOT7L	Q6ZUV0	252 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	REPIN1	Q9BWE0	567 aa	Known RBP	13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SH2D2A	Q9NP31	389 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TMED6	Q8WW62	240 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	LHX4	Q969G2	390 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM106CP	P0CH98	169 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ARL16	Q0P5N6	197 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	BVES	Q8NE79	360 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OR10A7	Q8NGE5	316 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	NPAP1	Q9NZP6	1156 aa		13.4	□□□□□ -0.26
PPFIA1-222	ENST00000532504	LOC390937	A0A1W2PQ73	354 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MUC1	P15941	1255 aa	Predicted RBP	13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PRB3	Q04118	309 aa	Predicted RBP	13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C4orf17	Q53FE4	359 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LRP11	Q86VZ4	500 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	HOGA1	Q86XE5	327 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF561	Q8N587	486 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C7orf69	Q9H7B7	122 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	IDI2-AS1	Q9NZ38	188 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CLCF1	Q9UBD9	225 aa		13.4	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MBD3L3	A6NE82	208 aa	Predicted RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504		K7EM74	188 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	METTL15P1	P0C7V9	234 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR13C7	P0DN81	318 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	NQO2	P16083	231 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ATF4	P18848	351 aa	Predicted RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TAS2R45	P59539	299 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	HTD2	P86397	168 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CALHM1	Q8IU99	346 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RNF141	Q8WVD5	230 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RSRP1	Q9BUV0	290 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PSG2	P11465	335 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TEX29	Q8N6K0	151 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FRZB	Q92765	325 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DOK5	Q9P104	306 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504		J3QKU1	62 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	H2AFB1	P0C5Y9	115 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SSTR5	P35346	364 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504		Q6ZNX1	250 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C1QL2	Q7Z5L3	287 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	KCNRG	Q8N5I3	272 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF835	Q9Y2P0	537 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	POMT1	Q9Y6A1	747 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TSPAN9	O75954	239 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PSMB3	P49720	205 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF529	Q6P280	563 aa		13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RBM38	Q9H0Z9	239 aa	Known RBP	13.39	□□□□□ -0.27
PPFIA1-222	ENST00000532504	JTB	O76095	146 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C14orf79	Q96F83	325 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MPDZ	O75970	2070 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LEUTX	A8MZ59	168 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	P2RX3	P56373	397 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	POLR2G	P62487	172 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	IL24	Q13007	206 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C1orf100	Q5SVJ3	147 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	IGFL3	Q6UXB1	125 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CLEC18B	Q6UXF7	455 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RPS10P5	Q9NQ39	176 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	COL4A3	Q01955	1670 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LAIR2	Q6ISS4	152 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FDX2	Q6P4F2	183 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ACP7	Q6ZNF0	438 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LILRB4	Q8NHJ6	448 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GPHA2	Q96T91	129 aa		13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ELF5	Q9UKW6	265 aa	Predicted RBP	13.38	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM24A	A6NFZ4	105 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	THBD	P07204	575 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	UBE2G1	P62253	170 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RAB32	Q13637	225 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM219A	Q8IW50	185 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PTX4	Q96A99	478 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ITPKC	Q96DU7	683 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DVL1	O14640	695 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	COX5A	P20674	150 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SP5	Q6BEB4	398 aa	Predicted RBP	13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SEZ6L2	Q6UXD5	910 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FBLIM1	Q8WUP2	373 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SLC25A22	Q9H936	323 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms