RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ARID1AO14497 2285 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 MEX3AA1L020 520 aaKnown RBP11.95□□□□□ -0.5
TTC39A-216ENST00000530004 SMLR1H3BR10 107 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 SIGLEC5O15389 551 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 HBZP02008 142 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 PDLIM4P50479 330 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-216ENST00000530004 SLC9A3R2Q15599 337 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 PHLDA2Q53GA4 152 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 C11orf88Q6PI97 169 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 ZNF565Q8N9K5 539 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 GALMQ96C23 342 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 DCTN5Q9BTE1 182 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 CHIAQ9BZP6 476 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 SLC22A5O76082 557 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 IL2RGP31785 369 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 SSTR5P35346 364 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 LPCAT3Q6P1A2 487 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 TRAT1Q6PIZ9 186 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 CLEC2AQ6UVW9 174 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 NLRC3Q7RTR2 1065 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 FAM168AQ92567 244 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 ARL11Q969Q4 196 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 SLC5A7Q9GZV3 580 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
TTC39A-216ENST00000530004 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
TTC39A-216ENST00000530004 TACC2O95359 2948 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 TANC2Q9HCD6 1990 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 TEX13DA0A0J9YY54 714 aaPredicted RBP11.93□□□□□ -0.5
TTC39A-216ENST00000530004 PPIHO43447 177 aaKnown RBP11.93□□□□□ -0.5
TTC39A-216ENST00000530004 SIX6O95475 246 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 ERP29P30040 261 aaKnown RBP11.93□□□□□ -0.5
TTC39A-216ENST00000530004 GNRHRP30968 328 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 CEACAM6P40199 344 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 KCTD9Q7L273 389 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
TTC39A-216ENST00000530004 TIMD4Q96H15 378 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 ZNF486Q96H40 463 aaPredicted RBP11.93□□□□□ -0.5
TTC39A-216ENST00000530004 RDH8Q9NYR8 311 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 PRR13Q9NZ81 148 aa11.93□□□□□ -0.5
TTC39A-216ENST00000530004 C15orf65H3BRN8 121 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 NDUFS8O00217 210 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 FSTL3O95633 263 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 C1QBP02746 253 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 HEXAP06865 529 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 GIPP09681 153 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-216ENST00000530004 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
TTC39A-216ENST00000530004 H2BFSP57053 126 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 DSCR9P59020 149 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 CLEC12BQ2HXU8 276 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 Q5PR19 223 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 AVPI1Q5T686 147 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 NOXA1Q86UR1 476 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 RAB1CQ92928 201 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 FOXC2Q99958 501 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OR6C3Q9NZP0 311 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 PIPOXQ9P0Z9 390 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 FLNBO75369 2602 aaKnown RBP11.92□□□□□ -0.5
TTC39A-216ENST00000530004 HSD17B6O14756 317 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 SPINT2O43291 252 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OR2A4O95047 310 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 IFNA2P01563 188 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 GZMHP20718 246 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 KRTAP1-3Q8IUG1 177 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 FGFRL1Q8N441 504 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 CCDC71LQ8N9Z2 235 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 RFESDQ8TAC1 157 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 OR2A7Q96R45 310 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
TTC39A-216ENST00000530004 NCOR1P1Q9H4R4 102 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 CCL28Q9NRJ3 127 aa11.92□□□□□ -0.5
TTC39A-216ENST00000530004 GPR31O00270 319 aa11.91□□□□□ -0.5
TTC39A-216ENST00000530004 CCSO14618 274 aa11.91□□□□□ -0.5
TTC39A-216ENST00000530004 TNFRSF13BO14836 293 aaPredicted RBP11.91□□□□□ -0.5
TTC39A-216ENST00000530004 ADAM20O43506 726 aa11.91□□□□□ -0.5
TTC39A-216ENST00000530004 NDUFB7P17568 137 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 546.5 ms