RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PRNTQ86SH4 94 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 LDLRAD3Q86YD5 345 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 ADIPOR1Q96A54 375 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 MRPS18AQ9NVS2 196 aaKnown RBP7.06□□□□□ -1.28
CTNND1-220ENST00000529526 OR5AC2Q9NZP5 309 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 PPIAL4AQ9Y536 164 aa7.06□□□□□ -1.28
CTNND1-220ENST00000529526 THSD7AQ9UPZ6 1657 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 IGSF23A1L1A6 192 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CXorf1O96002 111 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CD82P27701 267 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 UCP2P55851 309 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 RPL31P62899 125 aaKnown RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CEBPEQ15744 281 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF826PQ6ZT77 177 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 DOLPP1Q86YN1 238 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 TMEM251Q8N6I4 163 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 FAM216AQ8WUB2 273 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CHAC2Q8WUX2 184 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 HEXA-AS1Q9H8Q6 139 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF107Q9UII5 783 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 COL5A3P25940 1745 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 SIGLEC5O15389 551 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 DNPH1O43598 174 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 SEMA7AO75326 666 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 SCTP09683 121 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 IFITM3Q01628 133 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 NAAAQ02083 359 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 SNAI3Q3KNW1 292 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 PACRGQ96M98 296 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 TRPM6Q9BX84 2022 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 PITX3O75364 302 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 NGFRP08138 427 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 MDKP21741 143 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 MEOX2P50222 304 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 PPOXP50336 477 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 HIST3H3Q16695 136 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CEACAM21Q3KPI0 293 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 DHRS11Q6UWP2 260 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 OR2V2Q96R30 315 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 GPHA2Q96T91 129 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 P2RX4Q99571 388 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 NPAS1Q99742 590 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 PDE6DO43924 150 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 HBZP02008 142 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CXCL2P19875 107 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 CLPPQ16740 277 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 SLC25A45Q8N413 288 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 MRPL37Q9BZE1 423 aaKnown RBP7.05□□□□□ -1.28
CTNND1-220ENST00000529526 MS4A5Q9H3V2 200 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 OR2H2O95918 312 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 ATP1A1-AS1Q5TC04 95 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 FAM27BQ5VT28 67 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 OR8A1Q8NGG7 326 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 OR1L8Q8NGR8 309 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 TNFSF18Q9UNG2 199 aa7.05□□□□□ -1.28
CTNND1-220ENST00000529526 TRIP12Q14669 1992 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 CACNA1CQ13936 2221 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 CIDEAO60543 219 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 GCM2O75603 506 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 APCSP02743 223 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 RIGQ13278 110 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ELOBQ15370 118 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 DGAT2L7PQ6IED9 249 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 DPPA3Q6W0C5 159 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF714Q96N38 554 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 MAP1LC3CQ9BXW4 147 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 LYRM2Q9NU23 88 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 C1RLQ9NZP8 487 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 IL36RNQ9UBH0 155 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ELF5Q9UKW6 265 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 SNURFLB1AK76 121 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 GREM1O60565 184 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 CDS2O95674 445 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ERGP11308 486 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 STPG1Q5TH74 334 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 MRPL30Q8TCC3 161 aaKnown RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 K7N7A8 449 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 RAB29O14966 203 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 FTH1P19P0C7X4 201 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 NAT2P11245 290 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 PSMB2P49721 201 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 GABRA6Q16445 453 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 MRGPRGQ86SM5 289 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 EIF4E3Q8N5X7 224 aaKnown RBP7.04□□□□□ -1.28
CTNND1-220ENST00000529526 STARD4Q96DR4 205 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ANGPTL4Q9BY76 406 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 PARP11Q9NR21 331 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 HIGD1AQ9Y241 93 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 SLC35B1P78383 322 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ZBTB34Q8NCN2 500 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ITLN1Q8WWA0 313 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 SMIM12Q96EX1 92 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 RSG1Q9BU20 258 aa7.04□□□□□ -1.28
CTNND1-220ENST00000529526 ELOA3CA0A087WX78 387 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 A0A0U1RQV5 110 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms