RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
USF1-209ENST00000529476 MRPS7Q9Y2R9 242 aaKnown RBP11.39□□□□□ -0.59
USF1-209ENST00000529476 A0A0U1RQK1 487 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 MDFIC2A0A1B0GVS7 189 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 TRDCB7Z8K6 153 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 DTYMKP23919 212 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 GNG10P50151 68 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 MIDNQ504T8 468 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 CNIH2Q6PI25 160 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 SNX29P2Q8IUI4 249 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 IL1F10Q8WWZ1 152 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 GALMQ96C23 342 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 ZNF48Q96MX3 618 aaPredicted RBP11.38□□□□□ -0.59
USF1-209ENST00000529476 ST6GALNAC5Q9BVH7 336 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 OR2S2Q9NQN1 319 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 ZNRD1Q9P1U0 126 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 GNG12Q9UBI6 72 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 ADAM30Q9UKF2 790 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
USF1-209ENST00000529476 IGKV1D-8A0A087WSZ0 117 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 IGKV1-6A0A0C4DH72 117 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 MEIS3P1A6NDR6 274 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 TOR1AO14656 332 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 IGLV1-47P01700 117 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 GSTT2P0CG29 244 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 GSTT2BP0CG30 244 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 PPP1CCP36873 323 aaKnown RBP11.37□□□□□ -0.59
USF1-209ENST00000529476 LGALS4P56470 323 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 HTD2P86397 168 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 SCGB2A2Q13296 93 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 TUSC1Q2TAM9 212 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 DEFB112Q30KQ8 113 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 TMEM30BQ3MIR4 351 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 LDLRAD2Q5SZI1 272 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 OR9G1Q8NH87 305 aa11.37□□□□□ -0.59
USF1-209ENST00000529476 J3QR06 171 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 SLC31A2O15432 143 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 FABP7O15540 132 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 FCER2P06734 321 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 PAX6P26367 422 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 PRSS3P35030 304 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 PRRX1P54821 245 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
USF1-209ENST00000529476 MORN2Q502X0 79 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 IGSF11Q5DX21 431 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 Q6ZS49 121 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 ZNF439Q8NDP4 499 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 BEND2Q8NDZ0 799 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 OR4A4PQ8NGN8 299 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 ZNF596Q8TC21 504 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 DIRAS2Q96HU8 199 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 MMP27Q9H306 513 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 OR1A1Q9P1Q5 309 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 JPT1Q9UK76 154 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 FAM96BQ9Y3D0 163 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 A3GALT2U3KPV4 340 aa11.36□□□□□ -0.59
USF1-209ENST00000529476 TNFSF8P32971 234 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 ZNF134P52741 427 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 HLA-DRB5Q30154 266 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 STEAP3Q658P3 488 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 HOGA1Q86XE5 327 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 DYNAPQ8N1N2 210 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 PARP12Q9H0J9 701 aaKnown RBP11.35□□□□□ -0.59
USF1-209ENST00000529476 MMP28Q9H239 520 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 BATF3Q9NR55 127 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 SLC23A1Q9UHI7 598 aa11.35□□□□□ -0.59
USF1-209ENST00000529476 TBL2Q9Y4P3 447 aaKnown RBP11.35□□□□□ -0.59
USF1-209ENST00000529476 BUB1B-PAK6H3BSN5 160 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 BET1O15155 118 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 HSPA12AO43301 675 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 YPEL1O60688 119 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 IFNA2P01563 188 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 FBP1P09467 338 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 HTR1DP28221 377 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 CEACAM6P40199 344 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 CBX5P45973 191 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 Q3ZCU0 254 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 RNASE12Q5GAN4 147 aaKnown RBP11.34□□□□□ -0.59
USF1-209ENST00000529476 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 C8orf31Q8N9H6 132 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 BEST4Q8NFU0 473 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 CT45A3Q8NHU0 189 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 GPX8Q8TED1 209 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 YPEL2Q96QA6 119 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms