RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 OR6Q1Q8NGQ2 317 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 MRGPRDQ8TDS7 321 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 RAB9BQ9NP90 201 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
CAPN1-212ENST00000527887 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 ORC5O43913 435 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 PF4V1P10720 104 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 CD37P11049 281 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 FSTP19883 344 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 RAB3BP20337 219 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 PLPPR1Q8TBJ4 325 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 NOTCH3Q9UM47 2321 aa11.3□□□□□ -0.6
CAPN1-212ENST00000527887 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
CAPN1-212ENST00000527887 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
CAPN1-212ENST00000527887 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
CAPN1-212ENST00000527887 SNRNP70P08621 437 aaKnown RBP11.29□□□□□ -0.6
CAPN1-212ENST00000527887 CD33P20138 364 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 S100A5P33763 92 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 ETV6P41212 452 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 SCAND1P57086 179 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 MZT2AQ6P582 158 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 RFESDQ8TAC1 157 aa11.29□□□□□ -0.6
CAPN1-212ENST00000527887 DNAH3Q8TD57 4116 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 MCRIP1C9JLW8 97 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 PIN1P1O15428 100 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 CA11O75493 328 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 GLAP06280 429 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 SERPINA2P20848 420 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 IL3RAP26951 378 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 SLC6A1P30531 599 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 SSTR5P35346 364 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ZNF45Q02386 682 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-212ENST00000527887 EBI3Q14213 229 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 HES1Q14469 280 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 INSL4Q14641 139 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ZNF497Q6ZNH5 498 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 DRAM1Q8N682 238 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 OR56B4Q8NH76 319 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 CHPT1Q8WUD6 406 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 WDR12Q9GZL7 423 aaKnown RBP11.28□□□□□ -0.6
CAPN1-212ENST00000527887 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
CAPN1-212ENST00000527887 SHISA3A0PJX4 238 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 PSMB11A5LHX3 300 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 PF4P02776 101 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 MT-ND4P03905 459 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 TMEM11P17152 192 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 PTBP1P26599 531 aaKnown RBP eCLIP11.27□□□□□ -0.61
CAPN1-212ENST00000527887 GNG10P50151 68 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 MXD1Q05195 221 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 ZNF846Q147U1 533 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 LTC4SQ16873 150 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 SLC22A6Q4U2R8 563 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 C9orf152Q5JTZ5 239 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 UTF1Q5T230 341 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 STEAP3Q658P3 488 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 OR13C5Q8NGS8 318 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 PHF21AQ96BD5 680 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
CAPN1-212ENST00000527887 ZFP57Q9NU63 452 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 GFOD1Q9NXC2 390 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 RCC2Q9P258 522 aaKnown RBP11.27□□□□□ -0.61
CAPN1-212ENST00000527887 GHRLQ9UBU3 117 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 V9GY05 133 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
CAPN1-212ENST00000527887 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 A0A1W2PRX2 142 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 AIPO00170 330 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 HSD17B6O14756 317 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 TXNL1O43396 289 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 IGHV3-7P01780 117 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 CD40LGP29965 261 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 LOXL3P58215 753 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 SFXN4Q6P4A7 337 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 GLIPR1L1Q6UWM5 242 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 Q6ZPA2 131 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 LRRTM1Q86UE6 522 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms