RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 IL36RNQ9UBH0 155 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PRR14LQ5THK1 2151 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 SMCO3A2RU48 225 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 CEBPZOSA8MTT3 80 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PGLYRP1O75594 196 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-208ENST00000527323 CNOT4O95628 575 aaKnown RBP10.69□□□□□ -0.7
CAPN1-208ENST00000527323 IAPPP10997 89 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 MMP9P14780 707 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PAX9P55771 341 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 CLDN15P56746 228 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 Q0VFX4 171 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 OR56B2PQ8NGI1 322 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PLPPR1Q8TBJ4 325 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 MEGF10Q96KG7 1140 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 HES7Q9BYE0 225 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 STRADBQ9C0K7 418 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PRDM13Q9H4Q3 707 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 KIR2DS1A0A191URI9 304 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 CEACAM1P13688 526 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 EDN3P14138 238 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 FOLR3P41439 243 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 KIR2DS4P43632 304 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 HNF4GQ14541 408 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 KIR2DS1Q14954 304 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 C6orf15Q6UXA7 325 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-208ENST00000527323 TAAR3PQ9P1P4 343 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 TCFL5Q9UL49 500 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 A0A0G2JMM0 328 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1W2PPB8 328 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1W2PRS3 328 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 KIR3DP1A8MWS1 328 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 HS3ST1O14792 307 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 METTL15P1P0C7V9 234 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 TUBG1P23258 451 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 HERPUD1Q15011 391 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-208ENST00000527323 IL1F10Q8WWZ1 152 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 C14orf144Q96I85 54 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 PACRGQ96M98 296 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-208ENST00000527323 VSIRQ9H7M9 311 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 RBM7Q9Y580 266 aaKnown RBP10.68□□□□□ -0.7
CAPN1-208ENST00000527323 TRAPPC2LH3BP13 241 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 BCL2P10415 239 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 CCL2P13500 99 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 PRDX4Q13162 271 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A2PQ658T7 463 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 MKXQ8IYA7 352 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 OR5D13Q8NGL4 314 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 RDH5Q92781 318 aa10.68□□□□□ -0.7
CAPN1-208ENST00000527323 KALRNO60229 2985 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 SPTAN1Q13813 2472 aaKnown RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 A0A0G2JRQ6 117 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1B0GV90 55 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 CYB5R3P00387 301 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 F2RP25116 425 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 TLE1Q04724 770 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 M1APQ8TC57 530 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 PLK3Q9H4B4 646 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 GPR35Q9HC97 309 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 DCAF16Q9NXF7 216 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 ERRFI1Q9UJM3 462 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 RNF115Q9Y4L5 304 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 A0A087X0M5 115 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 IGHV1-45A0A0A0MS14 117 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1B0GX30 115 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 CLEC18AA5D8T8 446 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 H0Y980 276 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 CTXN2P0C2S0 81 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 RNF224P0DH78 156 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 PSG2P11465 335 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 COX6A1P12074 109 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 ELLP55199 621 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 DAZAP2Q15038 168 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 OR8G1Q15617 311 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 SPINK14Q6IE38 97 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 NECAP1Q8NC96 275 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 CLEC18CQ8NCF0 446 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 HIST1H2AAQ96QV6 131 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 CISD1Q9NZ45 108 aaKnown RBP10.67□□□□□ -0.7
CAPN1-208ENST00000527323 POLEQ07864 2286 aa10.67□□□□□ -0.7
CAPN1-208ENST00000527323 A0A096LPE4 126 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1B0GU03 582 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 A0A1W2PPZ6 126 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 NKX2-8O15522 239 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 P04436 131 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PKIAP61925 76 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 ADIRFQ15847 76 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 TMPRSS7Q7RTY8 843 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 MRPL21Q7Z2W9 205 aaKnown RBP10.66□□□□□ -0.7
CAPN1-208ENST00000527323 CPEB3Q8NE35 698 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms