RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PRAMEF6Q5VXH4 476 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 ASPHD2Q6ICH7 369 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C11orf71Q6IPW1 123 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 HAGHLQ6PII5 290 aaPredicted RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 CALHM1Q8IU99 346 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 CROCCP3Q8IVE0 287 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C11orf53Q8IXP5 236 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 JAGN1Q8N5M9 183 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 ZSCAN4Q8NAM6 433 aaPredicted RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 OR10AD1Q8NGE0 317 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 OR11L1Q8NGX0 322 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 OR51F2Q8NH61 342 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 ITLN1Q8WWA0 313 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 HPSE2Q8WWQ2 592 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 RDH5Q92781 318 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 RFT1Q96AA3 541 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C12orf43Q96C57 262 aaKnown RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 ISOC1Q96CN7 298 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C17orf77Q96MU5 243 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 SPACA5Q96QH8 159 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 S100A13Q99584 98 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 CCL19Q99731 98 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 UQCC2Q9BRT2 126 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 SIRPDQ9H106 197 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 METTL9Q9H1A3 318 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 DCSTAMPQ9H295 470 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 OR51I2Q9H344 312 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 LIME1Q9H400 295 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 METTL17Q9H7H0 456 aaPredicted RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 FN3KRPQ9HA64 309 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 PLGRKTQ9HBL7 147 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 UFSP2Q9NUQ7 469 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C1orf123Q9NWV4 160 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 PPP1R3CQ9UQK1 317 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 CADP27708 2225 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 CFAP46Q8IYW2 2715 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 SMG1Q96Q15 3661 aaKnown RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 ICE1Q9Y2F5 2266 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 ZFYVE26Q68DK2 2539 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 IGKV1-27A0A075B6S5 117 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 IGHV1-69-2A0A0G2JMI3 117 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 A0A0U1RRA0 63 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 LRRC30A6NM36 301 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 IFITM5A6NNB3 132 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 PMS2P5A8MQ11 134 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 HSBP1L1C9JCN9 74 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 LYNX1G3V0Z9 82 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 H3BMQ9 156 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 TRAPPC2LH3BP13 241 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 J3QT63 122 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 WRBO00258 174 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SLC17A2O00624 439 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ZNF780AO75290 641 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 LYNX1P0DP58 116 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 HTR2CP28335 458 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 CFHR2P36980 270 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 PMELP40967 661 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 POU3F4P49335 361 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 CRIP2P52943 208 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 CAV3P56539 151 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 TMEM33P57088 247 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR10A3P58181 314 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 MRPS11P82912 194 aaKnown RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 ZNF154Q13106 437 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SPCS2Q15005 226 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 RSU1Q15404 277 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 RAB11BQ15907 218 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 DGUOKQ16854 277 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 IDNKQ5T6J7 187 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 HES5Q5TA89 166 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 GLIPR1L1Q6UWM5 242 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ASCL4Q6XD76 172 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ZNF826PQ6ZT77 177 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SLC25A26Q70HW3 274 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 WDR86Q86TI4 376 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 LYPD6Q86Y78 171 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SAXO1Q8IYX7 474 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 PXT1Q8NFP0 134 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR51D1Q8NGF3 324 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR10V1Q8NGI7 309 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR5D18Q8NGL1 313 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR6M1Q8NGM8 313 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 OR10Z1Q8NGY1 313 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 NDNFQ8TB73 568 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 TNFAIP8L1Q8WVP5 186 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 AQP3Q92482 292 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 CCL17Q92583 94 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 NRGNQ92686 78 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 PKIBQ9C010 78 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 FGF23Q9GZV9 251 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 TLNRD1Q9H1K6 362 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ELL3Q9HB65 397 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 YAE1D1Q9NRH1 226 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ZNF701Q9NV72 531 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 RASL12Q9NYN1 266 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 TREM2Q9NZC2 230 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms