RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MMP28Q9H239 520 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 ZNF286AQ9HBT8 521 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 CCDC59Q9P031 241 aaKnown RBP10.04□□□□□ -0.8
CCS-202ENST00000525435 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 GNG12Q9UBI6 72 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
CCS-202ENST00000525435 SOX21Q9Y651 276 aaPredicted RBP10.04□□□□□ -0.8
CCS-202ENST00000525435 A0A075B6Q4 140 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 TRAV18A0A075B6X5 111 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 LY6LH3BQJ8 138 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 ITGB1BP1O14713 200 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 VENTXO95231 258 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 MNDAP41218 407 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 ARHGDIBP52566 201 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 MORN2Q502X0 79 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 OLFML2AQ68BL7 652 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 BAIAP2L2Q6UXY1 529 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 ZDHHC22Q8N966 263 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 DYNC2LI1Q8TCX1 351 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 FAM216AQ8WUB2 273 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
CCS-202ENST00000525435 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 COMMD3Q9UBI1 195 aa10.03□□□□□ -0.8
CCS-202ENST00000525435 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
CCS-202ENST00000525435 FCGR3AP08637 254 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 CTXN2P0C2S0 81 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 ZBTB25P24278 435 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 CBX5P45973 191 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 GNG2P59768 71 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 RPL15P61313 204 aaKnown RBP10.02□□□□□ -0.81
CCS-202ENST00000525435 HLA-DRB3P79483 266 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 MADCAM1Q13477 382 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 SSX2Q16385 188 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 LTC4SQ16873 150 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 Q6ZPA2 131 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 SLC25A48Q6ZT89 311 aaKnown RBP10.02□□□□□ -0.81
CCS-202ENST00000525435 LHFPL4Q7Z7J7 247 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 PRR18Q8N4B5 295 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 OR10X1Q8NGY0 326 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 SETD6Q8TBK2 473 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 TOLLIPQ9H0E2 274 aa10.02□□□□□ -0.81
CCS-202ENST00000525435 RBM38Q9H0Z9 239 aaKnown RBP10.02□□□□□ -0.81
CCS-202ENST00000525435 RSL24D1Q9UHA3 163 aaKnown RBP10.02□□□□□ -0.81
CCS-202ENST00000525435 MDFIC2A0A1B0GVS7 189 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 TMEM235A6NFC5 223 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 FABP7O15540 132 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 HOXA3O43365 443 aaPredicted RBP10.01□□□□□ -0.81
CCS-202ENST00000525435 IL3RAP26951 378 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 BRS3P32247 399 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 ZNF137PP52743 207 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 UBA52P62987 128 aaKnown RBP10.01□□□□□ -0.81
CCS-202ENST00000525435 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 TPTE2P1Q5T6R2 138 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 C16orf87Q6PH81 154 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 ZNF439Q8NDP4 499 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 C17orf50Q8WW18 174 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 IL1F10Q8WWZ1 152 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 DGCR14Q96DF8 476 aaKnown RBP10.01□□□□□ -0.81
CCS-202ENST00000525435 CYYR1Q96J86 154 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 SSX3Q99909 188 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 RABL2AQ9UBK7 228 aaPredicted RBP10.01□□□□□ -0.81
CCS-202ENST00000525435 RABL2BQ9UNT1 228 aa10.01□□□□□ -0.81
CCS-202ENST00000525435 FAM172BPA6NC97 362 aa10□□□□□ -0.81
CCS-202ENST00000525435 CCDC160A6NGH7 325 aa10□□□□□ -0.81
CCS-202ENST00000525435 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
CCS-202ENST00000525435 EIF4EP06730 217 aaKnown RBP10□□□□□ -0.81
CCS-202ENST00000525435 SCTP09683 121 aa10□□□□□ -0.81
CCS-202ENST00000525435 ELK1P19419 428 aa10□□□□□ -0.81
CCS-202ENST00000525435 RAB7AP51149 207 aa10□□□□□ -0.81
CCS-202ENST00000525435 ZNF134P52741 427 aa10□□□□□ -0.81
CCS-202ENST00000525435 CT45A1Q5HYN5 189 aa10□□□□□ -0.81
CCS-202ENST00000525435 UTF1Q5T230 341 aa10□□□□□ -0.81
CCS-202ENST00000525435 LIAT1Q6ZQX7 453 aa10□□□□□ -0.81
CCS-202ENST00000525435 OR8H3Q8N146 312 aa10□□□□□ -0.81
CCS-202ENST00000525435 OR52L2PQ8NGH6 319 aa10□□□□□ -0.81
CCS-202ENST00000525435 CT45A3Q8NHU0 189 aa10□□□□□ -0.81
CCS-202ENST00000525435 UBALD1Q8TB05 177 aa10□□□□□ -0.81
CCS-202ENST00000525435 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
CCS-202ENST00000525435 LEAP2Q969E1 77 aa10□□□□□ -0.81
CCS-202ENST00000525435 RPEQ96AT9 228 aa10□□□□□ -0.81
CCS-202ENST00000525435 CABLES2Q9BTV7 478 aa10□□□□□ -0.81
CCS-202ENST00000525435 ST6GALNAC5Q9BVH7 336 aa10□□□□□ -0.81
CCS-202ENST00000525435 SLIRPQ9GZT3 109 aaKnown RBP10□□□□□ -0.81
CCS-202ENST00000525435 SCPEP1Q9HB40 452 aa10□□□□□ -0.81
CCS-202ENST00000525435 ABCB10Q9NRK6 738 aa10□□□□□ -0.81
CCS-202ENST00000525435 ADAM30Q9UKF2 790 aa10□□□□□ -0.81
CCS-202ENST00000525435 HILPDAQ9Y5L2 63 aa10□□□□□ -0.81
CCS-202ENST00000525435 A3GALT2U3KPV4 340 aa10□□□□□ -0.81
CCS-202ENST00000525435 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms