RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 C19orf35Q6ZS72 473 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 Q6ZSR3 168 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 OR2W3Q7Z3T1 314 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 CBWD2Q8IUF1 395 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 CBR4Q8N4T8 237 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 GPR32P1Q8NGA4 272 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 OR1N2Q8NGR9 330 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 OR56B4Q8NH76 319 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 FAM151AQ8WW52 585 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 OR5P2Q8WZ92 322 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 FAM3CQ92520 227 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 MRPS31Q92665 395 aaKnown RBP2.66□□□□□ -1.98
CD44-217ENST00000525348 C8orf44Q96CB5 159 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 SMARCD1Q96GM5 515 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 SLC35G5Q96KT7 338 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 GPR82Q96P67 336 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 OR2M4Q96R27 311 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 CPXM1Q96SM3 734 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 SIGMAR1Q99720 223 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 NRIP2Q9BQI9 281 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 LXNQ9BS40 222 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 THTPAQ9BU02 230 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 SYT4Q9H2B2 425 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 TUBA4BQ9H853 241 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 ISG20L2Q9H9L3 353 aaKnown RBP2.66□□□□□ -1.98
CD44-217ENST00000525348 KLRF1Q9NZS2 232 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 GALPQ9UBC7 116 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 CLN8Q9UBY8 286 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 ERG28Q9UKR5 140 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 UBIAD1Q9Y5Z9 338 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 UBR3Q6ZT12 1888 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 RGPD2P0DJD1 1756 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 ANKRD36CQ5JPF3 1778 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 PCNTO95613 3336 aa2.66□□□□□ -1.98
CD44-217ENST00000525348 CHD3Q12873 2000 aaKnown RBP2.66□□□□□ -1.98
CD44-217ENST00000525348 PARP14Q460N5 1801 aa2.65□□□□□ -1.98
CD44-217ENST00000525348 GLYATL1P3A0A0U1RQE8 302 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 TINCRA0A1B0GVN0 87 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OR5H1A6NKK0 313 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FTCDNL1E5RQL4 147 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 RBFOX2O43251 390 aaKnown RBP eCLIP2.65□□□□□ -1.99
CD44-217ENST00000525348 MPZL2O60487 215 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FOXH1O75593 365 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FARS2O95363 451 aaKnown RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 CDS2O95674 445 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 RAB36O95755 333 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 TIMP1P01033 207 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 IFNA1P01562 189 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OPN1SWP03999 348 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 KLK1P06870 262 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ZNF14P17017 642 aaPredicted RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 ZNF43P17038 809 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ADCYAP1P18509 176 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 GGT1P19440 569 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ALOX5APP20292 161 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FGF9P31371 208 aaPredicted RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 GPR6P46095 362 aaPredicted RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 ACLYP53396 1101 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 HCCSP53701 268 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 SLC18A1P54219 525 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ZNF121P58317 390 aaPredicted RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 TPI1P60174 286 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 PAFAH1B2P68402 229 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 HOXC5Q00444 222 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 MYL5Q02045 173 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ST3GAL3Q11203 375 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ZNF235Q14590 738 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 EXOSC7Q15024 291 aaKnown RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 ARHGAP11BQ3KRB8 267 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 TTLL9Q3SXZ7 439 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 GGTA1PQ4G0N0 100 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 SPIN4Q56A73 249 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 PDZD11Q5EBL8 140 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FAM162BQ5T6X4 162 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 TMEM244Q5VVB8 128 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 SPATA31B1PQ5VZV4 182 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 GLYATQ6IB77 296 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 FAM71F2Q6NXP2 309 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 CDC42EP5Q6NZY7 148 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ALKAL2Q6UX46 152 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 ALKAL1Q6UXT8 129 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 COX15Q7KZN9 410 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 NIT1Q86X76 327 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 BLIDQ8IZY5 108 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OR56A4Q8NGH8 313 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OR4D11Q8NGI4 311 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OR9I1Q8NGQ6 314 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 OR10R2Q8NGX6 335 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 RDH11Q8TC12 318 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 HAVCR2Q8TDQ0 301 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 Q8WTZ3 238 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 RAB8BQ92930 207 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 UCN3Q969E3 161 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 PELI1Q96FA3 418 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 AURKBQ96GD4 344 aaPredicted RBP2.65□□□□□ -1.99
CD44-217ENST00000525348 SLC35E1Q96K37 410 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 YPEL4Q96NS1 127 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 MGLLQ99685 303 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 MICU1Q9BPX6 476 aa2.65□□□□□ -1.99
CD44-217ENST00000525348 NDFIP1Q9BT67 221 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms