RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 A0A0B4J203 849 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 TRAV39A0A0B4J263 110 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 RAB27BO00194 218 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 F2RL2O00254 374 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 NAPSAO96009 420 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 RCC1P18754 421 aaPredicted RBP10.04□□□□□ -0.8
SMCO4-202ENST00000525141 CD24P25063 80 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 PRRX1P54821 245 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 PLA2G7Q13093 441 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 PLAC9Q5JTB6 97 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 GPR141Q7Z602 305 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 OR4C13Q8NGP0 309 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 OR10R2Q8NGX6 335 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 OR4K15Q8NH41 348 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 RFESDQ8TAC1 157 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
SMCO4-202ENST00000525141 RAB3CQ96E17 227 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 PECRQ9BY49 303 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 ZNF286AQ9HBT8 521 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 KCNIP1Q9NZI2 227 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 ABRACLQ9P1F3 81 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 ETV7Q9Y603 341 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
SMCO4-202ENST00000525141 FAM172BPA6NC97 362 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 ADARB2-AS1A8MUL3 147 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 SPINT2O43291 252 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 SCGNO76038 276 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 GABARAPO95166 117 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 CSF1P09603 554 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 CD28P10747 220 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
SMCO4-202ENST00000525141 HTR1DP28221 377 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 SSTR5P35346 364 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 TGFBR1P36897 503 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
SMCO4-202ENST00000525141 VBP1P61758 197 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 NCS1P62166 190 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 ARL6IP1Q15041 203 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 CTF1Q16619 201 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 Q3ZCU0 254 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 IDNKQ5T6J7 187 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 GPR107Q5VW38 600 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 ZNF880Q6PDB4 577 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 C1QL4Q86Z23 238 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 LYG1Q8N1E2 194 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 OR9G1Q8NH87 305 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 ZNF596Q8TC21 504 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 SLC25A46Q96AG3 418 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 CREB3L1Q96BA8 519 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 NPFFR1Q9GZQ6 430 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 DPM3Q9P2X0 92 aa10.03□□□□□ -0.8
SMCO4-202ENST00000525141 C12orf77C9JDV5 145 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 TOR1AO14656 332 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 AMY1AP04745 511 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 AMY2AP04746 511 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 NFYBP25208 207 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 LOXL3P58215 753 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 MOGAT2Q3SYC2 334 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 LGALS14Q8TCE9 139 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 CYYR1Q96J86 154 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 TAF9BQ9HBM6 251 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMCO4-202ENST00000525141 ABCB10Q9NRK6 738 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 AK3Q9UIJ7 227 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 MGAT4AQ9UM21 535 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 KCNK7Q9Y2U2 307 aa10.02□□□□□ -0.81
SMCO4-202ENST00000525141 SERPINE3A8MV23 424 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 J3QR06 171 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 SDCBPO00560 298 aaPredicted RBP10.01□□□□□ -0.81
SMCO4-202ENST00000525141 HBZP02008 142 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 HIST1H1DP16402 221 aaKnown RBP10.01□□□□□ -0.81
SMCO4-202ENST00000525141 SERPINB10P48595 397 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 HTD2P86397 168 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 TMEM95Q3KNT9 176 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 MOB1BQ7L9L4 216 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 OR5H6Q8NGV6 325 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 NDNFQ8TB73 568 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 CMSS1Q9BQ75 279 aaKnown RBP10.01□□□□□ -0.81
SMCO4-202ENST00000525141 BCL7BQ9BQE9 202 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 PRSS22Q9GZN4 317 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 NAA50Q9GZZ1 169 aaKnown RBP10.01□□□□□ -0.81
SMCO4-202ENST00000525141 MMP28Q9H239 520 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 C12orf4Q9NQ89 552 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 RHBDL2Q9NX52 303 aa10.01□□□□□ -0.81
SMCO4-202ENST00000525141 GFOD1Q9NXC2 390 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms