RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PYROXD1Q8WU10 500 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 SPAG8Q99932 426 aaPredicted RBP4.89□□□□□ -1.63
NEDD8-203ENST00000524927 HDHD2Q9H0R4 259 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 CACYBPQ9HB71 228 aaKnown RBP4.89□□□□□ -1.63
NEDD8-203ENST00000524927 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
NEDD8-203ENST00000524927 NINJ2Q9NZG7 142 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 CALML5Q9NZT1 146 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 PYCARDQ9ULZ3 195 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 IFT52Q9Y366 437 aa4.89□□□□□ -1.63
NEDD8-203ENST00000524927 FAM183AA6NL82 134 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 NCBP2LA6PVI3 153 aaKnown RBP4.88□□□□□ -1.63
NEDD8-203ENST00000524927 ANKRD30BLA7E2S9 258 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 BUB1B-PAK6H3BSN5 160 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 MPZL2O60487 215 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 NXPH4O95158 308 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 ACSM4P0C7M7 580 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 FCGR2BP31994 310 aaPredicted RBP4.88□□□□□ -1.63
NEDD8-203ENST00000524927 FCGR2CP31995 323 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 GPR4P46093 362 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 SERPINB8P50452 374 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 LSM6P62312 80 aaKnown RBP4.88□□□□□ -1.63
NEDD8-203ENST00000524927 RPL18Q07020 188 aaKnown RBP4.88□□□□□ -1.63
NEDD8-203ENST00000524927 GAMTQ14353 236 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 RSPO1Q2MKA7 263 aaPredicted RBP4.88□□□□□ -1.63
NEDD8-203ENST00000524927 KRTAP27-1Q3LI81 207 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 DDI2Q5TDH0 399 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 OR52W1Q6IF63 320 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 Q6ZRG5 221 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 Q8N9W7 124 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 OR6F1Q8NGZ6 308 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 LINC00479Q96M42 142 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 RAB40CQ96S21 281 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 NRIP2Q9BQI9 281 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 PRSS27Q9BQR3 290 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 RNF167Q9H6Y7 350 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 IL1RAPQ9NPH3 570 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 INIPQ9NRY2 104 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 TNXBP22105 4242 aa4.88□□□□□ -1.63
NEDD8-203ENST00000524927 RER1O15258 196 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 IDH3BO43837 385 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 IGKV1D-33P01593 117 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 IGKV1-33P01594 117 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 SOX6P35712 828 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 DDOSTP39656 456 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 CRYBA2P53672 197 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 ACTBP60709 375 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 ZNF92Q03936 586 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 MEF2CQ06413 473 aaPredicted RBP4.87□□□□□ -1.63
NEDD8-203ENST00000524927 CALCOCO2Q13137 446 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 EBI3Q14213 229 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 P2RY14Q15391 338 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 HLA-DRB5Q30154 266 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 KRT71Q3SY84 523 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.87□□□□□ -1.63
NEDD8-203ENST00000524927 RIMKLAQ8IXN7 391 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 CD177Q8N6Q3 437 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 C15orf53Q8NAA6 179 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 OR4A15Q8NGL6 344 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 L3HYPDHQ96EM0 354 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 RASL11BQ9BPW5 248 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 HSPB9Q9BQS6 159 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 TMEM27Q9HBJ8 222 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 ZNF355PQ9NSJ1 428 aa4.87□□□□□ -1.63
NEDD8-203ENST00000524927 DIMT1Q9UNQ2 313 aaKnown RBP4.87□□□□□ -1.63
NEDD8-203ENST00000524927 NBDYA0A0U1RRE5 68 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 MEX3AA1L020 520 aaKnown RBP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 TMEM210A6NLX4 147 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 ZNF850A8MQ14 1090 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 EIF3HO15372 352 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 SSX5O60225 188 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 TAC1P20366 129 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 HLA-DMBP28068 263 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 CRISP3P54108 245 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 RPL27P61353 136 aaKnown RBP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 HIST1H3AP68431 136 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 GUCA2BQ16661 112 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 HIST2H3PS2Q5TEC6 136 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 HIST2H3AQ71DI3 136 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 ELMOD2Q8IZ81 293 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 Q8N6K4 173 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 KRTCAP2Q8N6L1 136 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 MINDY2Q8NBR6 621 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 OR56B2PQ8NGI1 322 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 FBXO25Q8TCJ0 367 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 PCNPQ8WW12 178 aaKnown RBP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 RPL3LQ92901 407 aaKnown RBP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 RPEQ96AT9 228 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 RARRES2Q99969 163 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 SLC35A5Q9BS91 424 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 WDR55Q9H6Y2 383 aaPredicted RBP4.86□□□□□ -1.63
NEDD8-203ENST00000524927 SP140LQ9H930 580 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 ZC4H2Q9NQZ6 224 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 KLHDC2Q9Y2U9 406 aa4.86□□□□□ -1.63
NEDD8-203ENST00000524927 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
NEDD8-203ENST00000524927 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
NEDD8-203ENST00000524927 hADV38S2A0JD32 116 aa4.85□□□□□ -1.63
NEDD8-203ENST00000524927 RFPL4AA6NLU0 287 aa4.85□□□□□ -1.63
NEDD8-203ENST00000524927 RFPL4AL1F8VTS6 287 aa4.85□□□□□ -1.63
NEDD8-203ENST00000524927 G3V318 75 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms