RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 C4orf33Q8N1A6 199 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 CEP112Q8N8E3 955 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNF491Q8N8L2 437 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZFP41Q8N8Y5 198 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 CCDC63Q8NA47 563 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 CHST4Q8NCG5 386 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNRF1Q8ND25 227 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ATP6V1C2Q8NEY4 427 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 OR10AD1Q8NGE0 317 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 OR52M1Q8NGK5 317 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 OR9G4Q8NGQ1 327 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNF671Q8TAW3 534 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 HAVCR2Q8TDQ0 301 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 DEFB104AQ8WTQ1 72 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 SPRYD4Q8WW59 207 aaPredicted RBP1.04□□□□□ -2.24
CD44-212ENST00000524922 CACNG8Q8WXS5 425 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 SPTSSAQ969W0 71 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 MAGOHBQ96A72 148 aaKnown RBP1.04□□□□□ -2.24
CD44-212ENST00000524922 C10orf35Q96D05 121 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 USMG5Q96IX5 58 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNF488Q96MN9 340 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNF714Q96N38 554 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 RDH12Q96NR8 316 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ABHD1Q96SE0 405 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 SH3GL3Q99963 347 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 MICU1Q9BPX6 476 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 RTL8AQ9BWD3 113 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 PKIBQ9C010 78 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 TMEM133Q9H2Q1 129 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 OR51I1Q9H343 314 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 NIPAL2Q9H841 368 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 TUBA4BQ9H853 241 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 TMEM27Q9HBJ8 222 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 SLC25A19Q9HC21 320 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 RAB9BQ9NP90 201 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 INIPQ9NRY2 104 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 MRGBPQ9NV56 204 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ZNF446Q9NWS9 450 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 RPS6KB2Q9UBS0 482 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 DUX4Q9UBX2 424 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 UBQLN2Q9UHD9 624 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 CYB5R1Q9UHQ9 305 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 FZR1Q9UM11 496 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 CHMP2BQ9UQN3 213 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 ERGIC3Q9Y282 383 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 PIGLQ9Y2B2 252 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 STARD10Q9Y365 291 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 POLR3HQ9Y535 204 aaPredicted RBP1.04□□□□□ -2.24
CD44-212ENST00000524922 DNAJC15Q9Y5T4 150 aa1.04□□□□□ -2.24
CD44-212ENST00000524922 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 IGKV1D-17A0A075B6S4 117 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 LOC102724200A0A096LPH7 203 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 TRAV2A0A0B4J234 112 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TRAV10A0A0B4J240 114 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 A0A0U1RQV5 110 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ARRDC5A6NEK1 342 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 E9PBE3 544 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 BUB1B-PAK6H3BSN5 160 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 M0R135 149 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CXCR6O00574 342 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 XKRYO14609 159 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RNF13O43567 381 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ZNF737O75373 536 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SEC22BO75396 215 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RBBP9O75884 186 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SUPT7LO94864 414 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 NDUFA3O95167 84 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR5F1O95221 314 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 IFNA14P01570 189 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 GYPAP02724 150 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ARG1P05089 322 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RPSAP08865 295 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 NR2F1P10589 423 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PSG2P11465 335 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CCL2P13500 99 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MIFP14174 115 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PSMB6P28072 239 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 HTR2AP28223 471 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CD40LGP29965 261 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 GNRHRP30968 328 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 IFNA8P32881 189 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SOX6P35712 828 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 GPR4P46093 362 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 NPBWR2P48146 333 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MEOX2P50222 304 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RAB9AP51151 201 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CRYBA2P53672 197 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PRRX1P54821 245 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 NCALDP61601 193 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 GRB2P62993 217 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 RPL38P63173 70 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 GNG3P63215 75 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 DR1Q01658 176 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SLC34A1Q06495 639 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 GABPB1Q06547 395 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 RPL18Q07020 188 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 CKAP4Q07065 602 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 C2orf54Q08AI8 447 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TMEM267Q0VDI3 215 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 IL24Q13007 206 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms