RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PLEKHA1Q9HB21 404 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 HES4Q9HCC6 221 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 TUBG2Q9NRH3 451 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 RBFOX1Q9NWB1 397 aaKnown RBP2.38□□□□□ -2.03
CSDE1-208ENST00000524652 C1orf123Q9NWV4 160 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 CHCHD3Q9NX63 227 aaKnown RBP2.38□□□□□ -2.03
CSDE1-208ENST00000524652 NKIRAS2Q9NYR9 191 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 PTTG2Q9NZH5 202 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 CTSZQ9UBR2 303 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 FOXJ3Q9UPW0 622 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 PPP1R3CQ9UQK1 317 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
CSDE1-208ENST00000524652 WIPI2Q9Y4P8 454 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 MPC1Q9Y5U8 109 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
CSDE1-208ENST00000524652 IGKV1D-17A0A075B6S4 117 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 LOC100506127A0A0U1RQW1 187 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 LRP5LA4QPB2 252 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR5B21A6NL26 309 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM210A6NLX4 147 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CEACAM18A8MTB9 384 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SRRM5B3KS81 715 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 F5H0A9 414 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 J3QT63 122 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SLC22A1O15245 554 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 NOS1APO75052 506 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GATBO75879 557 aaKnown RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GABARAPO95166 117 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CDRT1O95170 752 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 IGHV2-5P01817 119 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GYPAP02724 150 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ALDOBP05062 364 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 FRMD6-AS1P0C7T7 363 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SLC2A2P11168 524 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 RAB3AP20336 220 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CFL1P23528 166 aaKnown RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GIFP27352 417 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 FGF9P31371 208 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SDC2P34741 201 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF93P35789 620 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CFHR2P36980 270 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 POU3F4P49335 361 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SRP9P49458 86 aaKnown RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 RBP2P50120 134 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 EFNB2P52799 333 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SNU13P55769 128 aaKnown RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 MTCP1P56278 107 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CLDN12P56749 244 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CD81P60033 236 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 BTG1P62324 171 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GNG3P63215 75 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 QRFPP83859 136 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 MXD1Q05195 221 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 IL24Q13007 206 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GAGE2BQ13066 116 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 PDZK1IP1Q13113 114 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 UNC119Q13432 240 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SPCS2Q15005 226 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CARTPTQ16568 116 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF181Q2M3W8 571 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 PCGF3Q3KNV8 242 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 PIGYQ3MUY2 71 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF404Q494X3 552 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GAGE2EQ4V326 116 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 HSD17B12Q53GQ0 312 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TCTEX1D4Q5JR98 221 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 HES5Q5TA89 166 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 DDI2Q5TDH0 399 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GPR107Q5VW38 600 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TEX36Q5VZQ5 186 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 STUMQ69YW2 141 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR10K2Q6IF99 312 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 GAGE2AQ6NT46 116 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 Q6P435 159 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ASCL4Q6XD76 172 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF841Q6ZN19 808 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ACP7Q6ZNF0 438 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SLC25A26Q70HW3 274 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 C5orf24Q7Z6I8 188 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CLVS1Q8IUQ0 354 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-208ENST00000524652 MS4A15Q8N5U1 240 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CD177Q8N6Q3 437 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 FAM216BQ8N7L0 139 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM104Q8NE00 496 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CCDC54Q8NEL0 328 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR5D14Q8NGL3 314 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR5H6Q8NGV6 325 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR10Z1Q8NGY1 313 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 OR8S1Q8NH09 359 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 CLDND2Q8NHS1 167 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 ANGPTL6Q8NI99 470 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 NDNFQ8TB73 568 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 HAVCR2Q8TDQ0 301 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 FCGR1BQ92637 280 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 RDH5Q92781 318 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SLAMF9Q96A28 289 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 SPSB1Q96BD6 273 aa2.37□□□□□ -2.03
CSDE1-208ENST00000524652 C10orf35Q96D05 121 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms