RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ZNF488Q96MN9 340 aa8.42□□□□□ -1.06
SPARC-202ENST00000520687 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
SPARC-202ENST00000520687 TOLLIPQ9H0E2 274 aa8.42□□□□□ -1.06
SPARC-202ENST00000520687 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
SPARC-202ENST00000520687 IL36RNQ9UBH0 155 aa8.42□□□□□ -1.06
SPARC-202ENST00000520687 TRAPPC2LQ9UL33 140 aa8.42□□□□□ -1.06
SPARC-202ENST00000520687 IGKV1-6A0A0C4DH72 117 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 A0A1W2PR80 420 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 ABCD4O14678 606 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 PGLYRP1O75594 196 aaPredicted RBP8.41□□□□□ -1.06
SPARC-202ENST00000520687 IGHV3-13P01766 116 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 CRYAAP02489 173 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 GRPP07492 148 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 F2RP25116 425 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 SELENOVP59797 346 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 SEM1Q6ZVN7 128 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 SELENOHQ8IZQ5 122 aaKnown RBP8.41□□□□□ -1.06
SPARC-202ENST00000520687 OR4D5Q8NGN0 318 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 ARL11Q969Q4 196 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 TP53RKQ96S44 253 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 OPN3Q9H1Y3 402 aaPredicted RBP8.41□□□□□ -1.06
SPARC-202ENST00000520687 ARV1Q9H2C2 271 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 TAF9BQ9HBM6 251 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 FAM212BQ9NTI7 297 aaPredicted RBP8.41□□□□□ -1.06
SPARC-202ENST00000520687 TAS2R3Q9NYW6 316 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 TINAGQ9UJW2 476 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 RTTNQ86VV8 2226 aa8.41□□□□□ -1.06
SPARC-202ENST00000520687 A0A1B0GU03 582 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 OOEPA6NGQ2 149 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 MSGN1A6NI15 193 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 ATG12O94817 140 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 HEXAP06865 529 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 SERPINE2P07093 398 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 GLRXP35754 106 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
SPARC-202ENST00000520687 RAB5CP51148 216 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 ERVS71-1P61550 626 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 MYO7BQ6PIF6 2116 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 ACP7Q6ZNF0 438 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 C11orf53Q8IXP5 236 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 BATF2Q8N1L9 274 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 RELL2Q8NC24 303 aaPredicted RBP8.4□□□□□ -1.06
SPARC-202ENST00000520687 OR11L1Q8NGX0 322 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
SPARC-202ENST00000520687 NCOR1P1Q9H4R4 102 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 RAB9BQ9NP90 201 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 LPAR3Q9UBY5 353 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 ERRFI1Q9UJM3 462 aaPredicted RBP8.4□□□□□ -1.06
SPARC-202ENST00000520687 LSM5Q9Y4Y9 91 aaKnown RBP8.4□□□□□ -1.06
SPARC-202ENST00000520687 FAM215AQ9Y5M1 114 aa8.4□□□□□ -1.06
SPARC-202ENST00000520687 MED12LQ86YW9 2145 aa8.4□□□□□ -1.07
SPARC-202ENST00000520687 FREM1Q5H8C1 2179 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 SIRPB1O00241 398 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 HSPB6O14558 160 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 PRRG2O14669 202 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 MLNRO43193 412 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 ZNHIT1O43257 154 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 HSPA12AO43301 675 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 WISP2O76076 250 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 RCC1P18754 421 aaPredicted RBP8.39□□□□□ -1.07
SPARC-202ENST00000520687 TMEM33P57088 247 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 BAXQ07812 192 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 MEX3BQ6ZN04 569 aaKnown RBP8.39□□□□□ -1.07
SPARC-202ENST00000520687 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 COMMD1Q8N668 190 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 GALMQ96C23 342 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 LURAP1Q96LR2 239 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 PLEKHF2Q9H8W4 249 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 MMP26Q9NRE1 261 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 LIN7CQ9NUP9 197 aaKnown RBP8.39□□□□□ -1.07
SPARC-202ENST00000520687 IGKV1D-13A0A0B4J2D9 117 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 A1L4Q6 167 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 A6NLC8 198 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 H2AFB1P0C5Y9 115 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 FAM157CP0CG43 387 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 IGKV1-13P0DP09 117 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 SULT1A2P50226 295 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 FABP6P51161 128 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 VAMP2P63027 116 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 ID3Q02535 119 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 ALKBH6Q3KRA9 238 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 ZNF474Q6S9Z5 364 aaPredicted RBP8.39□□□□□ -1.07
SPARC-202ENST00000520687 WDR82Q6UXN9 313 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 FOXRED2Q8IWF2 684 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 PLPPR1Q8TBJ4 325 aa8.39□□□□□ -1.07
SPARC-202ENST00000520687 TMED6Q8WW62 240 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms