RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 A0A1W2PQL4 384 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 ODF3BA8MYP8 253 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 H3BSA7 217 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 J3QLI3 93 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 YKT6O15498 198 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 CTSEP14091 401 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 ZNF7P17097 686 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 GADD45AP24522 165 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 KCNJ3P48549 501 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 HADHBP55084 474 aaKnown RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 RWDD2BP57060 319 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 OR10A3P58181 314 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 SLC35A2P78381 396 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 ZNF117Q03924 483 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 PDGFRLQ15198 375 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 SDIM1Q6ZPB5 146 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 Q6ZRU5 148 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 C2orf73Q8N5S3 287 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 ZFAND2AQ8N6M9 145 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 OR10A6Q8NH74 314 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 ZNRF2Q8NHG8 242 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 CCDC12Q8WUD4 166 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 ATP6V1G3Q96LB4 118 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 DNAJC30Q96LL9 226 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 MGLLQ99685 303 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 MED18Q9BUE0 208 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 SLC19A3Q9BZV2 496 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 METTL17Q9H7H0 456 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 TREM1Q9NP99 234 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 TXNL4BQ9NX01 149 aaKnown RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 FAM206AQ9NX38 181 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 TMEM216Q9P0N5 145 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 OR51B4Q9Y5P0 310 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 ALG5Q9Y673 324 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 MINOS1-NBL1R4GNA1 71 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
SKP1-207ENST00000520417 MYO9BQ13459 2157 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 CEP170Q5SW79 1584 aa1.17□□□□□ -2.22
SKP1-207ENST00000520417 PHYHO14832 338 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 SOD1P00441 154 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 NPPAP01160 153 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 LIMS3P0CW19 117 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 LIMS4P0CW20 117 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 ORM2P19652 201 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 CASQ1P31415 396 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 CD200P41217 278 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 MAGEA6P43360 314 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 GABRA4P48169 554 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 ACTBP60709 375 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 ACTG1P63261 375 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 GTF2BQ00403 316 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 USF2Q15853 346 aaPredicted RBP1.16□□□□□ -2.22
SKP1-207ENST00000520417 TMEM249Q2WGJ8 235 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 FAM229BQ4G0N7 80 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 COPS6Q7L5N1 327 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 MTERF4Q7Z6M4 381 aaKnown RBP1.16□□□□□ -2.22
SKP1-207ENST00000520417 ATP6V1C2Q8NEY4 427 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 OR5K1Q8NHB7 308 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 SUN5Q8TC36 379 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 TMIGD2Q96BF3 282 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 MBOAT7Q96N66 472 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 MED10Q9BTT4 135 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 CHST5Q9GZS9 411 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 GTSF1LQ9H1H1 148 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 PSORS1C2Q9UIG4 136 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 DNAJC12Q9UKB3 198 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 RAB3GAP2Q9H2M9 1393 aa1.16□□□□□ -2.22
SKP1-207ENST00000520417 H3BRN7 92 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 LIN7AO14910 233 aaPredicted RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 ZNF189O75820 626 aaPredicted RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 SLC35E2BP0CK96 405 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 GZMBP10144 247 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 SLC25A16P16260 332 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 PVALBP20472 110 aaPredicted RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 PSMB3P49720 205 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 PSMD7P51665 324 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 RAB8AP61006 207 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 PRDX4Q13162 271 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 SYCP1Q15431 976 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 MRPL51Q4U2R6 128 aaKnown RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 TRMT12Q53H54 448 aaKnown RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 TIMM23BQ5SRD1 257 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 VN1R4Q7Z5H5 301 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 TMEM25Q86YD3 366 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 SLC13A5Q86YT5 568 aaPredicted RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 OR11H1Q8NG94 326 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 RORBQ92753 470 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 TMEM56Q96MV1 263 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 ZNF251Q9BRH9 671 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 SMDT1Q9H4I9 107 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 CFAP45Q9UL16 551 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 PSMD13Q9UNM6 376 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 MTCH2Q9Y6C9 303 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 PTPRJQ12913 1337 aa1.15□□□□□ -2.23
SKP1-207ENST00000520417 USP42Q9H9J4 1324 aaKnown RBP1.15□□□□□ -2.23
SKP1-207ENST00000520417 KMT2EQ8IZD2 1858 aa1.14□□□□□ -2.23
SKP1-207ENST00000520417 IGHV3-73A0A0B4J1V6 119 aa1.14□□□□□ -2.23
SKP1-207ENST00000520417 LINC00854A0A1B0GVQ3 168 aa1.14□□□□□ -2.23
SKP1-207ENST00000520417 ERICH2A1L162 156 aa1.14□□□□□ -2.23
SKP1-207ENST00000520417 C9J4A7 227 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms