RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 Q96M85 177 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 MBOAT7Q96N66 472 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 NAP1L5Q96NT1 182 aaPredicted RBP0.22□□□□□ -2.37
PCM1-208ENST00000518877 MYCBPQ99417 103 aaPredicted RBP0.22□□□□□ -2.37
PCM1-208ENST00000518877 PITX2Q99697 317 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 CYSTM1Q9H1C7 97 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 C11orf49Q9H6J7 331 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 RMND1Q9NWS8 449 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 IFNKQ9P0W0 207 aa0.22□□□□□ -2.37
PCM1-208ENST00000518877 PTPRBP23467 1997 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 ARFGEF3Q5TH69 2177 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 TMSB15BA0A087X1C1 80 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 IGHV3-15A0A0B4J1V0 119 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 RFPL4AA6NLU0 287 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 RFPL4AL1F8VTS6 287 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 H3BPC8 53 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 CDIPTO14735 213 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 MBP02144 154 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 ESDP10768 282 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 PTMSP20962 102 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 RAP1GDS1P52306 607 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 TSPEAR-AS2P59090 65 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 SLC38A11Q08AI6 406 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 KRTAP21-1Q3LI58 79 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 C6orf183Q5T699 404 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 Q6ZT83 130 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 KRTAP19-3Q7Z4W3 81 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 C15orf53Q8NAA6 179 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 FAM184AQ8NB25 1140 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 OR4K17Q8NGC6 315 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 FGF13Q92913 245 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 PGLYRP3Q96LB9 341 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 GLT1D1Q96MS3 346 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 CDCA4Q9BXL8 241 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 BCL2L14Q9BZR8 327 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 DDX18Q9NVP1 670 aaKnown RBP0.21□□□□□ -2.38
PCM1-208ENST00000518877 VAPAQ9P0L0 249 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 SCML1Q9UN30 329 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 MYO15BQ96JP2 1530 aa0.21□□□□□ -2.38
PCM1-208ENST00000518877 AQRO60306 1485 aaKnown RBP eCLIP0.21□□□□□ -2.38
PCM1-208ENST00000518877 CACNA1BQ00975 2339 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 MYO5BQ9ULV0 1848 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 TRAV8-2A0A0B4J237 113 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 I3L4J1 428 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 CASC3O15234 703 aaKnown RBP0.2□□□□□ -2.38
PCM1-208ENST00000518877 CDK14O94921 469 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 C1QCP02747 245 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 SLC25A16P16260 332 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 CBX5P45973 191 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 HSPA13P48723 471 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 AQP5P55064 265 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 FAM162BQ5T6X4 162 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 HBMQ6B0K9 141 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 LAMTOR1Q6IAA8 161 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 CCDC121Q6ZUS5 278 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 DOLPP1Q86YN1 238 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 SYS1Q8N2H4 156 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 ASCC1Q8N9N2 400 aaKnown RBP0.2□□□□□ -2.38
PCM1-208ENST00000518877 OR4P4Q8NGL7 312 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 OR6N2Q8NGY6 317 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 CDKL2Q92772 493 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 MRPS24Q96EL2 167 aaKnown RBP0.2□□□□□ -2.38
PCM1-208ENST00000518877 MGLLQ99685 303 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 OR51E2Q9H255 320 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 HAUS4Q9H6D7 363 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 METTL17Q9H7H0 456 aaPredicted RBP0.2□□□□□ -2.38
PCM1-208ENST00000518877 PSME2Q9UL46 239 aa0.2□□□□□ -2.38
PCM1-208ENST00000518877 ZNF532Q9HCE3 1301 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 TRBV6-5A0A0K0K1A5 114 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 B4DEV8 164 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 H0YIV9 168 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 ZNF737O75373 536 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 PGLYRP1O75594 196 aaPredicted RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 VAPBO95292 243 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 SNAI1O95863 264 aaPredicted RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 ZNF728P0DKX0 622 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 CCL3P10147 92 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 PSMA1P25786 263 aaKnown RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 CALRP27797 417 aaKnown RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 SERPINB10P48595 397 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 GABARAPL2P60520 117 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 C1QTNF8P60827 252 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 TRAM1Q15629 374 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 UNQ6190/PRO20217Q6UXQ8 127 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 FAM183BPQ6ZVS7 135 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 PID1Q7Z2X4 250 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 C10orf126Q8N4M7 172 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 OR52K2Q8NGK3 314 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 OR5D18Q8NGL1 313 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 GTF2H4Q92759 462 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 SLC35G5Q96KT7 338 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 EBNA1BP2Q99848 306 aaKnown RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 COPS4Q9BT78 406 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 SYT4Q9H2B2 425 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 GAL3ST2Q9H3Q3 398 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 IFT46Q9NQC8 304 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 RPRD1BQ9NQG5 326 aaKnown RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 PSMD13Q9UNM6 376 aa0.19□□□□□ -2.38
PCM1-208ENST00000518877 DNMT1P26358 1616 aaKnown RBP0.19□□□□□ -2.38
PCM1-208ENST00000518877 BRWD1Q9NSI6 2320 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms