RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF880Q6PDB4 577 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 SLC16A12Q6ZSM3 486 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 OR2W3Q7Z3T1 314 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 RBM14Q96PK6 669 aaKnown RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 OCSTAMPQ9BR26 566 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 PARP12Q9H0J9 701 aaKnown RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 TXNL4BQ9NX01 149 aaKnown RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 GNG12Q9UBI6 72 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 STEAP1Q9UHE8 339 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 AMMECR1Q9Y4X0 333 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 TET2Q6N021 2002 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-219ENST00000518824 MGAM2Q2M2H8 2515 aa10.61□□□□□ -0.71
VEGFA-219ENST00000518824 IGHV1-3A0A0C4DH29 117 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 OOSP1A8MZH6 123 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 HSD17B6O14756 317 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 SPINT2O43291 252 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 CA11O75493 328 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 OR2F2O95006 317 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 CLEC2LP0C7M8 214 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 CD28P10747 220 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 MNDAP41218 407 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-219ENST00000518824 HMGN3Q15651 99 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 NEDD8Q15843 81 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 ABCA11PQ4W5N1 156 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 MORN2Q502X0 79 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 C10orf99Q6UWK7 81 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 TREML4Q6UXN2 200 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
VEGFA-219ENST00000518824 ODF3L1Q8IXM7 274 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 CREB3L1Q96BA8 519 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 PECRQ9BY49 303 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 WNT10AQ9GZT5 417 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 LIN7BQ9HAP6 207 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 OR2S2Q9NQN1 319 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 PLEKHJ1Q9NW61 149 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 VWFP04275 2813 aa10.6□□□□□ -0.71
VEGFA-219ENST00000518824 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 LPLP06858 475 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 RAB3BP20337 219 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 MYL9P24844 172 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 RAB7AP51149 207 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 MOB3BQ86TA1 216 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 C8orf31Q8N9H6 132 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 SETD6Q8TBK2 473 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 RTN4IP1Q8WWV3 396 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-219ENST00000518824 URM1Q9BTM9 101 aaKnown RBP10.59□□□□□ -0.71
VEGFA-219ENST00000518824 STUB1Q9UNE7 303 aa10.59□□□□□ -0.71
VEGFA-219ENST00000518824 GAPDHP04406 335 aaKnown RBP10.58□□□□□ -0.72
VEGFA-219ENST00000518824 GADD45AP24522 165 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 FGF9P31371 208 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-219ENST00000518824 HES1Q14469 280 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 KCTD21Q4G0X4 260 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 Q6ZTK2 550 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 THNSL2Q86YJ6 484 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 OR8H3Q8N146 312 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 IL1F10Q8WWZ1 152 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 FCGR1BQ92637 280 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 CHCHD6Q9BRQ6 235 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-219ENST00000518824 KCNIP1Q9NZI2 227 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
VEGFA-219ENST00000518824 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-219ENST00000518824 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 RAB27BO00194 218 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 PDCD5O14737 125 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 SCTP09683 121 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 FAM106CPP0CH98 169 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 TMEM11P17152 192 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 GALP22466 123 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 TGFBR1P36897 503 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-219ENST00000518824 OR3A3P47888 321 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 ZNF137PP52743 207 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 Q3ZCU0 254 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 C9orf152Q5JTZ5 239 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 C16orf82Q7Z2V1 217 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 Q8N6K4 173 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-219ENST00000518824 EAF1Q96JC9 268 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-219ENST00000518824 CENPOQ9BU64 300 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 RAB22AQ9UL26 194 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 HSF4Q9ULV5 492 aa10.57□□□□□ -0.72
VEGFA-219ENST00000518824 TRBV6-6A0A0A6YYG2 114 aa10.56□□□□□ -0.72
VEGFA-219ENST00000518824 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
VEGFA-219ENST00000518824 H3BUI4 141 aa10.56□□□□□ -0.72
VEGFA-219ENST00000518824 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
VEGFA-219ENST00000518824 YPEL1O60688 119 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms