RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C2orf73Q8N5S3 287 aaPredicted RBP1.75□□□□□ -2.13
SQLE-202ENST00000518604 OR5AK3PQ8NH89 298 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 TREM1Q9NP99 234 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 ASCL3Q9NQ33 180 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 FBXL3Q9UKT7 428 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 OR51B4Q9Y5P0 310 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 DNMT1P26358 1616 aaKnown RBP1.75□□□□□ -2.13
SQLE-202ENST00000518604 MYO5BQ9ULV0 1848 aa1.75□□□□□ -2.13
SQLE-202ENST00000518604 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 TMEM94Q12767 1356 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 KNCNA6PVL3 124 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 C9J4A7 227 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 HSBP1L1C9JCN9 74 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 CDK14O94921 469 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 S1PR2O95136 353 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 CRYGDP07320 174 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 CPMP14384 443 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 STC1P52823 247 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 DLX6P56179 175 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 DEFB103AP81534 67 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 ZNF117Q03924 483 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 BSPH1Q075Z2 132 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 FOXF1Q12946 379 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 TMED1Q13445 227 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 HTR4Q13639 388 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 TIMM23BQ5SRD1 257 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 OTUD6BQ8N6M0 293 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 OR51H1Q8NH63 302 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 ERMNQ8TAM6 284 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 LRRC45Q96CN5 670 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 DNAJC30Q96LL9 226 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 TMEM56Q96MV1 263 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 FAM210AQ96ND0 272 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 ACBD6Q9BR61 282 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 UPK3BQ9BT76 320 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 C1QTNF6Q9BXI9 259 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 CRB1P82279 1406 aa1.74□□□□□ -2.13
SQLE-202ENST00000518604 LRPPRCP42704 1394 aaKnown RBP1.73□□□□□ -2.13
SQLE-202ENST00000518604 SLIT2O94813 1529 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 MKRN2OSH3BPM6 223 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 BRI3O95415 125 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 SYT1P21579 422 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 KDELR2P33947 212 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 GABRA4P48169 554 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 DYNLL1P63167 89 aaKnown RBP1.73□□□□□ -2.13
SQLE-202ENST00000518604 SLC35A2P78381 396 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 ANGPT1Q15389 498 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 Q6ZRU5 148 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 SYCE1Q8N0S2 351 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 ZNRF2Q8NHG8 242 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 SUN5Q8TC36 379 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 RNASEH2CQ8TDP1 164 aaKnown RBP1.73□□□□□ -2.13
SQLE-202ENST00000518604 MED10Q9BTT4 135 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 MED18Q9BUE0 208 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 SLC19A3Q9BZV2 496 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 CXCL16Q9H2A7 254 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 LINC00527Q9UJ94 153 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 ALG5Q9Y673 324 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 PCNX2A6NKB5 2137 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 KMT2EQ8IZD2 1858 aa1.73□□□□□ -2.13
SQLE-202ENST00000518604 VWDEQ8N2E2 1590 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 CLUHO75153 1309 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 COL5A3P25940 1745 aaPredicted RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 TRPM3Q9HCF6 1732 aaPredicted RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 MPZL2O60487 215 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 IGKV1-16P04430 117 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 P0DMU3 169 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 FAM231AP0DMU4 169 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 FAM231CP0DMU5 169 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 IFI30P13284 250 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 ZNF7P17097 686 aaPredicted RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 LPAR6P43657 344 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 PSMB3P49720 205 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 SULT1A2P50226 295 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 RWDD2BP57060 319 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 PDGFRLQ15198 375 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 CLEC12BQ2HXU8 276 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 MRPL51Q4U2R6 128 aaKnown RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 TRMT12Q53H54 448 aaKnown RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 YIPF7Q8N8F6 280 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 ATP6V1C2Q8NEY4 427 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 SMIM12Q96EX1 92 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 MND1Q9BWT6 205 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 METTL17Q9H7H0 456 aaPredicted RBP1.72□□□□□ -2.13
SQLE-202ENST00000518604 C1orf109Q9NX04 203 aa1.72□□□□□ -2.13
SQLE-202ENST00000518604 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 A0A0J9YX75 114 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 DHRS12A0PJE2 317 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 ERICH2A1L162 156 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 IQCF5A8MTL0 148 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 OVOL1O14753 267 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 PVALBP20472 110 aaPredicted RBP1.71□□□□□ -2.14
SQLE-202ENST00000518604 ATP6V0CP27449 155 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 OPRM1P35372 400 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 SCGB1D4Q6XE38 83 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 CCDC121Q6ZUS5 278 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 SPATA24Q86W54 205 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 CRLF3Q8IUI8 442 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 OR52E4Q8NGH9 312 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms