RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SETD6Q8TBK2 473 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 GALMQ96C23 342 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 OR2S2Q9NQN1 319 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 ABRACLQ9P1F3 81 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 JPT1Q9UK76 154 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 MGAT4AQ9UM21 535 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 TCF19Q9Y242 345 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 ETV7Q9Y603 341 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 A0A1W2PPE3 182 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 MFNGO00587 321 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 RAG2P55895 527 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 OLFML2AQ68BL7 652 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 CCDC144NLQ6NUI1 221 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 OR10V1Q8NGI7 309 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 TOMM40LQ969M1 308 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 RPEQ96AT9 228 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 OCSTAMPQ9BR26 566 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 RAB18Q9NP72 206 aa17.71■□□□□ 0.43
VEGFA-217ENST00000518538 SERPINE3A8MV23 424 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 SCGNO76038 276 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 CD3GP09693 182 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 GNB3P16520 340 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 RPS19P39019 145 aaKnown RBP17.7■□□□□ 0.42
VEGFA-217ENST00000518538 ALDH3B2P48448 385 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 MRPS15P82914 257 aaKnown RBP17.7■□□□□ 0.42
VEGFA-217ENST00000518538 ARL6IP1Q15041 203 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 C5orf24Q7Z6I8 188 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 ANKRD13BQ86YJ7 626 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 ZNF439Q8NDP4 499 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 OR4F5Q8NH21 305 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 Q9N2K0 584 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 PITPNC1Q9UKF7 332 aa17.7■□□□□ 0.42
VEGFA-217ENST00000518538 A6NDX4 124 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 TFAP2AP05549 437 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 BRS3P32247 399 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 MNDAP41218 407 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 NCS1P62166 190 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 GNMTQ14749 295 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 MORN2Q502X0 79 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 SLC25A48Q6ZT89 311 aaKnown RBP17.69■□□□□ 0.42
VEGFA-217ENST00000518538 OR52L2PQ8NGH6 319 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 OR5H6Q8NGV6 325 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.69■□□□□ 0.42
VEGFA-217ENST00000518538 RHBDL2Q9NX52 303 aa17.69■□□□□ 0.42
VEGFA-217ENST00000518538 A0A075B6Q4 140 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 SLC31A2O15432 143 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 CHST1O43916 411 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 YPEL1O60688 119 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 GABARAPO95166 117 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 SERPINB10P48595 397 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 RAB7AP51149 207 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 VBP1P61758 197 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 HLA-DRB3P79483 266 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 STEAP3Q658P3 488 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 CCBE1Q6UXH8 406 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-217ENST00000518538 GPR141Q7Z602 305 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 IL1F10Q8WWZ1 152 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 SLC25A38Q96DW6 304 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 YPEL2Q96QA6 119 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 SPATA2Q9UM82 520 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 MMP24Q9Y5R2 645 aa17.68■□□□□ 0.42
VEGFA-217ENST00000518538 A0A1B0GUS0 222 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 RGS11O94810 467 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 MDKP21741 143 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-217ENST00000518538 IL3RAP26951 378 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 PPP1CCP36873 323 aaKnown RBP17.67■□□□□ 0.42
VEGFA-217ENST00000518538 ZNF134P52741 427 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 ZNF816Q0VGE8 651 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-217ENST00000518538 DIAPH2-AS1Q14236 149 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 CT45A1Q5HYN5 189 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 LY6G6FQ5SQ64 297 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 Q6ZSV7 163 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 OR8H3Q8N146 312 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 CT45A3Q8NHU0 189 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 SLC25A46Q96AG3 418 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 NAA50Q9GZZ1 169 aaKnown RBP17.67■□□□□ 0.42
VEGFA-217ENST00000518538 BEX1Q9HBH7 125 aa17.67■□□□□ 0.42
VEGFA-217ENST00000518538 A0A1W2PPI3 338 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 HSD17B6O14756 317 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 TSPAN9O75954 239 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 FCGR3AP08637 254 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 CTF1Q16619 201 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 CDNFQ49AH0 187 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 GPR107Q5VW38 600 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 TMEM219Q86XT9 240 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 ST6GALNAC6Q969X2 333 aa17.66■□□□□ 0.42
VEGFA-217ENST00000518538 TRDCB7Z8K6 153 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 TIMM23O14925 209 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 GAPDHP04406 335 aaKnown RBP17.65■□□□□ 0.42
VEGFA-217ENST00000518538 SCTP09683 121 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 ZNF137PP52743 207 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 ARFRP1Q13795 201 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 C3orf56Q8N813 242 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 PHF21AQ96BD5 680 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 ABHD14AQ9BUJ0 271 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 NPFFR1Q9GZQ6 430 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 C16orf95Q9H693 158 aa17.65■□□□□ 0.42
VEGFA-217ENST00000518538 RANBP3Q9H6Z4 567 aaPredicted RBP17.65■□□□□ 0.42
VEGFA-217ENST00000518538 A0A0A6YYH2 397 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 CLPSL1A2RUU4 121 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms