RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ALPLP05186 524 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 GTF2F2P13984 249 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 BLVRBP30043 206 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 PPIFP30405 207 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 RAB9AP51151 201 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ZNF137PP52743 207 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 RUNX1Q01196 453 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 Q3ZCU0 254 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 C6orf183Q5T699 404 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 OR6Q1Q8NGQ2 317 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ORAI1Q96D31 301 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 GHITMQ9H3K2 345 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 GMPPBQ9Y5P6 360 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 A3GALT2U3KPV4 340 aa11.8□□□□□ -0.52
CSGALNACT1-204ENST00000517494 DNAH7Q8WXX0 4024 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 A0A1W2PN81 502 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 LINC01619G3V211 115 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 NBR2O15453 112 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 LANCL1O43813 399 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 IGLV1-40P01703 118 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 BDKRB2P30411 391 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 CHRNA7P36544 502 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 VHLP40337 213 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 RITA1Q96K30 269 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 CHCHD6Q9BRQ6 235 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ANKRD60Q9BZ19 345 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 OR2S2Q9NQN1 319 aa11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 CHCHD3Q9NX63 227 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-204ENST00000517494 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 A0A087WW49 117 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 CIB2O75838 187 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 HLA-DRB1P01911 266 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ADARB1P78563 741 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 PITPNAQ00169 270 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 RIPK1Q13546 671 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 GNMTQ14749 295 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 XAF1Q6GPH4 301 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 RAB12Q6IQ22 244 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 LIN54Q6MZP7 749 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 HAPLN4Q86UW8 402 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 PYDC1Q8WXC3 89 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ISOC1Q96CN7 298 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 CITED4Q96RK1 184 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ZNF184Q99676 751 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 ABHD14AQ9BUJ0 271 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 SPACA1Q9HBV2 294 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
CSGALNACT1-204ENST00000517494 IGHV3-11P01762 117 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 OR8U9P0C7N5 309 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 RCC1P18754 421 aaPredicted RBP11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 RAB40BQ12829 278 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 PLGLAQ15195 96 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 OR13C5Q8NGS8 318 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 MUL1Q969V5 352 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 Q96MT0 163 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 RSRP1Q9BUV0 290 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 TOLLIPQ9H0E2 274 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 TAF9BQ9HBM6 251 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 ERGIC3Q9Y282 383 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 PEX16Q9Y5Y5 336 aa11.77□□□□□ -0.53
CSGALNACT1-204ENST00000517494 UBE2QL1A1L167 161 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 MAGEA13PA6NCF6 341 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 LGALS1P09382 135 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 GABRB1P18505 474 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 OR3A3P47888 321 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 ALDH3A2P51648 485 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 RPL22L1Q6P5R6 122 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 JAGN1Q8N5M9 183 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 CST11Q9H112 138 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 BANF2Q9H503 90 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 FOXA2Q9Y261 457 aaPredicted RBP11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 MRPS28Q9Y2Q9 187 aaKnown RBP11.76□□□□□ -0.53
CSGALNACT1-204ENST00000517494 STARD9Q9P2P6 4700 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 LDLRAD4O15165 306 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 IGHV4-30-4P0DP06 118 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 RASSF2P50749 326 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 NDPQ00604 133 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 GPR176Q14439 515 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 MORN2Q502X0 79 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 OR2G6Q5TZ20 316 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 AWAT2Q6E213 333 aa11.75□□□□□ -0.53
CSGALNACT1-204ENST00000517494 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms