RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BLVRBP30043 206 aaPredicted RBP1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 RCVRNP35243 200 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 SULT1A2P50226 295 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 PCOTHQ58A44 107 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 RBM48Q5RL73 367 aaKnown RBP1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 ZBTB8OSQ8IWT0 167 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 EBNA1BP2Q99848 306 aaKnown RBP1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 ACBD6Q9BR61 282 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 GTSF1LQ9H1H1 148 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 C16orf95Q9H693 158 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 MS4A12Q9NXJ0 267 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 CHMP5Q9NZZ3 219 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 COMMD9Q9P000 198 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 ADGRB3O60242 1522 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 ICE1Q9Y2F5 2266 aa1.94□□□□□ -2.1
HMGCS1-207ENST00000514610 H3BSA7 217 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 J3QKU1 62 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 PHYHO14832 338 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 UGT2B11O75310 529 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 ASS1P00966 412 aaKnown RBP1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 GADD45AP24522 165 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 DEFB103AP81534 67 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 XRCC4Q13426 336 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 USF2Q15853 346 aaPredicted RBP1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 TIMM23BQ5SRD1 257 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 CAPZA3Q96KX2 299 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 C1QTNF6Q9BXI9 259 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 OR52A5Q9H2C5 316 aa1.93□□□□□ -2.1
HMGCS1-207ENST00000514610 OTOFQ9HC10 1997 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 ERICH4A6NGS2 130 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 MKRN2OSH3BPM6 223 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 FBP1P09467 338 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 CPMP14384 443 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 ZNF7P17097 686 aaPredicted RBP1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 SPAM1P38567 509 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 GABRA4P48169 554 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 PSMB3P49720 205 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 RAB8AP61006 207 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 GTF2BQ00403 316 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 HES1Q14469 280 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 TMEM176BQ3YBM2 270 aaPredicted RBP1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 TRMT12Q53H54 448 aaKnown RBP1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 TTC33Q6PID6 262 aaPredicted RBP1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 OR4C16Q8NGL9 310 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 UPK3BQ9BT76 320 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 ASCL3Q9NQ33 180 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 TMEM106BQ9NUM4 274 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 TMEM216Q9P0N5 145 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 MINOS1-NBL1R4GNA1 71 aa1.92□□□□□ -2.1
HMGCS1-207ENST00000514610 COL5A3P25940 1745 aaPredicted RBP1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 C9J4A7 227 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 SYNGR1O43759 233 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 SOD1P00441 154 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 OR4A8P0C604 315 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 RD3LP0DJH9 198 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 KDELR2P33947 212 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 DLX6P56179 175 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 SS18Q15532 418 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 MAPK14Q16539 360 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 ZNF767PQ75MW2 155 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 TMEM75Q8N9X5 138 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 OR5K1Q8NHB7 308 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 TAMM41Q96BW9 452 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 UGT2B28Q9BY64 529 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 CLUHO75153 1309 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 MAP3K19Q56UN5 1328 aa1.91□□□□□ -2.1
HMGCS1-207ENST00000514610 ADAMTSL1Q8N6G6 1762 aa1.9□□□□□ -2.1
HMGCS1-207ENST00000514610 A0A0J9YX75 114 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 VPS37CA5D8V6 355 aaPredicted RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 F5H5K5 113 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 SMLR1H3BR10 107 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 NDUFS6O75380 124 aaKnown RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 IFI30P13284 250 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 ORM2P19652 201 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 PPP1CCP36873 323 aaKnown RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 STC1P52823 247 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 SLAMF1Q13291 335 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 PDK2Q15119 407 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 MRPL51Q4U2R6 128 aaKnown RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 ACSBG2Q5FVE4 666 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 BOD1L2Q8IYS8 172 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 CCDC12Q8WUD4 166 aaPredicted RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 MED10Q9BTT4 135 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 NRBP2Q9NSY0 501 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 MRPS16Q9Y3D3 137 aaKnown RBP1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 SORL1Q92673 2214 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 ADAMTS7Q9UKP4 1686 aa1.9□□□□□ -2.11
HMGCS1-207ENST00000514610 COL11A1P12107 1806 aaPredicted RBP1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 NUP153P49790 1475 aaKnown RBP1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 ATG2BQ96BY7 2078 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 C19orf71A6NCJ1 209 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 KNCNA6PVL3 124 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 IQCF5A8MTL0 148 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 M0QYV0 167 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 CYTH3O43739 400 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 NQO1P15559 274 aaKnown RBP1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 ACTBP60709 375 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 ACTG1P63261 375 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms